Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AL445567.2-201ENST00000618935 498 ntBASIC3.57□□□□□ -1.84
SHOX2O60902 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.57□□□□□ -1.84
SHOX2O60902 AP003072.4-201ENST00000624580 310 ntBASIC3.57□□□□□ -1.84
SHOX2O60902 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.57□□□□□ -1.84
SHOX2O60902 AC093831.2-201ENST00000624393 3427 ntBASIC3.57□□□□□ -1.84
SHOX2O60902 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.57□□□□□ -1.84
SHOX2O60902 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.56□□□□□ -1.84
SHOX2O60902 AC025125.1-201ENST00000624743 1922 ntBASIC3.56□□□□□ -1.84
SHOX2O60902 AC138393.1-206ENST00000540997 1886 ntBASIC3.56□□□□□ -1.84
SHOX2O60902 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.56□□□□□ -1.84
SHOX2O60902 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SHOX2O60902 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SHOX2O60902 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SHOX2O60902 AL359715.4-201ENST00000606629 1436 ntBASIC3.56□□□□□ -1.84
SHOX2O60902 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.56□□□□□ -1.84
SHOX2O60902 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SHOX2O60902 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SHOX2O60902 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SHOX2O60902 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.56□□□□□ -1.84
SHOX2O60902 MIR554-201ENST00000384874 96 ntBASIC3.56□□□□□ -1.84
SHOX2O60902 GSTA12P-201ENST00000402398 508 ntBASIC3.56□□□□□ -1.84
SHOX2O60902 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.56□□□□□ -1.84
SHOX2O60902 OR8G2P-201ENST00000412796 908 ntBASIC3.56□□□□□ -1.84
SHOX2O60902 CASKP1-201ENST00000412870 582 ntBASIC3.56□□□□□ -1.84
SHOX2O60902 AC006960.1-201ENST00000419980 153 ntBASIC3.56□□□□□ -1.84
SHOX2O60902 AL390879.2-203ENST00000426943 1121 ntBASIC3.56□□□□□ -1.84
SHOX2O60902 RPS3AP12-201ENST00000443616 753 ntBASIC3.56□□□□□ -1.84
SHOX2O60902 OR7L1P-201ENST00000456181 380 ntBASIC3.56□□□□□ -1.84
SHOX2O60902 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.56□□□□□ -1.84
SHOX2O60902 RPS3AP6-201ENST00000484430 795 ntBASIC3.56□□□□□ -1.84
SHOX2O60902 RPS4XP15-201ENST00000489210 795 ntBASIC3.56□□□□□ -1.84
SHOX2O60902 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.56□□□□□ -1.84
SHOX2O60902 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.56□□□□□ -1.84
SHOX2O60902 AC108120.2-201ENST00000512973 294 ntBASIC3.56□□□□□ -1.84
SHOX2O60902 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.56□□□□□ -1.84
SHOX2O60902 SNORA31.9-201ENST00000516429 84 ntBASIC3.56□□□□□ -1.84
SHOX2O60902 AP003730.1-201ENST00000524605 285 ntBASIC3.56□□□□□ -1.84
SHOX2O60902 HIGD1AP10-201ENST00000527837 282 ntBASIC3.56□□□□□ -1.84
SHOX2O60902 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.56□□□□□ -1.84
SHOX2O60902 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.56□□□□□ -1.84
SHOX2O60902 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.56□□□□□ -1.84
SHOX2O60902 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.56□□□□□ -1.84
SHOX2O60902 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.56□□□□□ -1.84
SHOX2O60902 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.56□□□□□ -1.84
SHOX2O60902 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.56□□□□□ -1.84
SHOX2O60902 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.56□□□□□ -1.84
SHOX2O60902 AC006077.1-201ENST00000604746 343 ntBASIC3.56□□□□□ -1.84
SHOX2O60902 AP004372.1-201ENST00000604842 844 ntBASIC3.56□□□□□ -1.84
SHOX2O60902 AL355816.1-201ENST00000607951 118 ntBASIC3.56□□□□□ -1.84
SHOX2O60902 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.56□□□□□ -1.84
SHOX2O60902 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.56□□□□□ -1.84
SHOX2O60902 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.56□□□□□ -1.84
SHOX2O60902 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SHOX2O60902 AC116563.2-201ENST00000624751 535 ntBASIC3.56□□□□□ -1.84
SHOX2O60902 SNORA50A-202ENST00000629536 136 ntBASIC3.56□□□□□ -1.84
SHOX2O60902 AF001550.2-201ENST00000636643 217 ntBASIC3.56□□□□□ -1.84
SHOX2O60902 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SHOX2O60902 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
SHOX2O60902 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SHOX2O60902 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SHOX2O60902 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SHOX2O60902 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SHOX2O60902 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SHOX2O60902 ENSAP1-201ENST00000392855 326 ntBASIC3.55□□□□□ -1.84
SHOX2O60902 OR6C69P-201ENST00000394268 893 ntBASIC3.55□□□□□ -1.84
SHOX2O60902 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.55□□□□□ -1.84
SHOX2O60902 RN7SKP202-201ENST00000410439 330 ntBASIC3.55□□□□□ -1.84
SHOX2O60902 RPL26P37-201ENST00000411983 438 ntBASIC3.55□□□□□ -1.84
SHOX2O60902 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.55□□□□□ -1.84
SHOX2O60902 SDCBPP3-201ENST00000419629 891 ntBASIC3.55□□□□□ -1.84
SHOX2O60902 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.55□□□□□ -1.84
SHOX2O60902 AL353093.1-201ENST00000441292 436 ntBASIC3.55□□□□□ -1.84
SHOX2O60902 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.55□□□□□ -1.84
SHOX2O60902 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SHOX2O60902 SNORA74D-201ENST00000516404 141 ntBASIC3.55□□□□□ -1.84
SHOX2O60902 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.55□□□□□ -1.84
SHOX2O60902 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.55□□□□□ -1.84
SHOX2O60902 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.55□□□□□ -1.84
SHOX2O60902 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.55□□□□□ -1.84
SHOX2O60902 MIR3939-201ENST00000582614 106 ntBASIC3.55□□□□□ -1.84
SHOX2O60902 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.55□□□□□ -1.84
SHOX2O60902 AC099676.1-201ENST00000608886 657 ntBASIC3.55□□□□□ -1.84
SHOX2O60902 AC007342.8-201ENST00000623278 678 ntBASIC3.55□□□□□ -1.84
SHOX2O60902 RLIMP1-201ENST00000339626 1680 ntBASIC3.55□□□□□ -1.84
SHOX2O60902 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.55□□□□□ -1.84
SHOX2O60902 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SHOX2O60902 RNF6P1-201ENST00000444889 1784 ntBASIC3.54□□□□□ -1.84
SHOX2O60902 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.54□□□□□ -1.84
SHOX2O60902 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SHOX2O60902 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SHOX2O60902 SNORA63.1-201ENST00000362493 131 ntBASIC3.54□□□□□ -1.84
SHOX2O60902 U3.6-201ENST00000363622 211 ntBASIC3.54□□□□□ -1.84
SHOX2O60902 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SHOX2O60902 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SHOX2O60902 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.54□□□□□ -1.84
SHOX2O60902 OR2B8P-201ENST00000432841 938 ntBASIC3.54□□□□□ -1.84
SHOX2O60902 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.54□□□□□ -1.84
SHOX2O60902 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SHOX2O60902 AL353898.1-201ENST00000444055 238 ntBASIC3.54□□□□□ -1.84
SHOX2O60902 AC087385.1-201ENST00000475062 312 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms