Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 AL359263.1-201ENST00000441188 2796 ntBASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 NXF4-202ENST00000416098 1465 ntBASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 HSPD1P4-201ENST00000547203 1702 ntBASIC2.2□□□□□ -2.06
KRTAP4-3Q9BYR4 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 AC112243.1-201ENST00000623949 3851 ntBASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 AC116667.1-201ENST00000604855 2072 ntBASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 AL031985.3-201ENST00000565390 2449 ntBASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 CECR2-206ENST00000612582 9645 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 API5-210ENST00000534600 1760 ntTSL 5 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 GNG5P1-201ENST00000255500 204 ntBASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 RNA5SP188-201ENST00000362916 129 ntBASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 snoU2_19.2-201ENST00000363024 80 ntBASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 Y_RNA.183-201ENST00000363882 113 ntBASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 Y_RNA.212-201ENST00000364177 102 ntBASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 RNU4-50P-201ENST00000364361 141 ntBASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 RNU6-611P-201ENST00000384276 104 ntBASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 RNU6-456P-201ENST00000384493 107 ntBASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 Y_RNA.525-201ENST00000384570 113 ntBASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 Y_RNA.526-201ENST00000384572 110 ntBASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 MIR130B-202ENST00000385018 82 ntBASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 AL360182.1-201ENST00000397433 468 ntBASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 RPS4XP9-201ENST00000405151 780 ntBASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 RPA3-204ENST00000406109 434 ntTSL 3 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 RNU6-141P-201ENST00000410499 105 ntBASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 RNU6-193P-201ENST00000410977 107 ntBASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 HMGB1P11-201ENST00000413899 637 ntBASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 AL663061.1-201ENST00000416625 580 ntBASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 AL929472.1-201ENST00000417484 429 ntBASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 AC008753.1-201ENST00000423096 284 ntBASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 AIMP1P2-201ENST00000425294 312 ntBASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 RPL23AP25-201ENST00000430973 463 ntBASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 AL512844.2-201ENST00000433990 593 ntBASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 AC094019.1-201ENST00000434678 472 ntBASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 AC023141.3-201ENST00000436698 278 ntBASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 CRYGGP-201ENST00000443337 145 ntBASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 GAPDHP25-201ENST00000447061 1001 ntBASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 CALM1P2-201ENST00000452941 448 ntBASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 HLA-DPA3-207ENST00000454398 229 ntBASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 RNU7-63P-201ENST00000459054 62 ntBASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 RNU7-107P-201ENST00000459121 61 ntBASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 AC087879.1-201ENST00000474343 374 ntBASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 AC126389.1-201ENST00000477436 290 ntBASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 CREM-242ENST00000490511 469 ntTSL 2 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC2.19□□□□□ -2.06
KRTAP4-3Q9BYR4 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms