Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.03□□□□□ -1.92
VPS13AQ96RL7 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
VPS13AQ96RL7 AL392112.1-201ENST00000605115 829 ntBASIC3.03□□□□□ -1.92
VPS13AQ96RL7 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
VPS13AQ96RL7 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC3.03□□□□□ -1.92
VPS13AQ96RL7 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
VPS13AQ96RL7 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS13AQ96RL7 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VPS13AQ96RL7 AC004552.1-201ENST00000419089 348 ntBASIC3.02□□□□□ -1.93
VPS13AQ96RL7 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.02□□□□□ -1.93
VPS13AQ96RL7 AC025181.1-201ENST00000477507 416 ntBASIC3.02□□□□□ -1.93
VPS13AQ96RL7 PCBP2P3-201ENST00000509726 843 ntBASIC3.02□□□□□ -1.93
VPS13AQ96RL7 AC027176.1-201ENST00000560204 514 ntBASIC3.02□□□□□ -1.93
VPS13AQ96RL7 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VPS13AQ96RL7 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VPS13AQ96RL7 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VPS13AQ96RL7 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
VPS13AQ96RL7 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
VPS13AQ96RL7 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS13AQ96RL7 RN7SKP56-201ENST00000410513 331 ntBASIC3.02□□□□□ -1.93
VPS13AQ96RL7 OR51A3P-201ENST00000413596 924 ntBASIC3.02□□□□□ -1.93
VPS13AQ96RL7 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.02□□□□□ -1.93
VPS13AQ96RL7 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC3.02□□□□□ -1.93
VPS13AQ96RL7 AC114781.4-201ENST00000513707 639 ntBASIC3.02□□□□□ -1.93
VPS13AQ96RL7 AC005798.1-201ENST00000513715 387 ntBASIC3.02□□□□□ -1.93
VPS13AQ96RL7 OR7M1P-201ENST00000608946 533 ntBASIC3.02□□□□□ -1.93
VPS13AQ96RL7 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VPS13AQ96RL7 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
VPS13AQ96RL7 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
VPS13AQ96RL7 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VPS13AQ96RL7 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS13AQ96RL7 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.02□□□□□ -1.93
VPS13AQ96RL7 MIR1289-2-201ENST00000408360 111 ntBASIC3.02□□□□□ -1.93
VPS13AQ96RL7 AC012065.2-201ENST00000421295 375 ntBASIC3.02□□□□□ -1.93
VPS13AQ96RL7 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.02□□□□□ -1.93
VPS13AQ96RL7 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.02□□□□□ -1.93
VPS13AQ96RL7 AP000936.2-201ENST00000447151 681 ntBASIC3.02□□□□□ -1.93
VPS13AQ96RL7 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.02□□□□□ -1.93
VPS13AQ96RL7 RPL21P6-201ENST00000479171 504 ntBASIC3.02□□□□□ -1.93
VPS13AQ96RL7 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
VPS13AQ96RL7 AC008837.1-201ENST00000511513 412 ntBASIC3.02□□□□□ -1.93
VPS13AQ96RL7 BNIP3P8-201ENST00000597863 560 ntBASIC3.02□□□□□ -1.93
VPS13AQ96RL7 AC096947.1-201ENST00000603233 470 ntBASIC3.02□□□□□ -1.93
VPS13AQ96RL7 AL354950.1-201ENST00000614150 568 ntBASIC3.02□□□□□ -1.93
VPS13AQ96RL7 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
VPS13AQ96RL7 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.01□□□□□ -1.93
VPS13AQ96RL7 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VPS13AQ96RL7 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC3.01□□□□□ -1.93
VPS13AQ96RL7 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VPS13AQ96RL7 DDX18P4-201ENST00000511690 1966 ntBASIC3.01□□□□□ -1.93
VPS13AQ96RL7 MIR34A-201ENST00000385130 110 ntBASIC3.01□□□□□ -1.93
VPS13AQ96RL7 MIR764-201ENST00000390811 85 ntBASIC3.01□□□□□ -1.93
VPS13AQ96RL7 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.01□□□□□ -1.93
VPS13AQ96RL7 AL049874.4-201ENST00000557593 255 ntBASIC3.01□□□□□ -1.93
VPS13AQ96RL7 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.01□□□□□ -1.93
VPS13AQ96RL7 SNORD53-201ENST00000579969 78 ntBASIC3.01□□□□□ -1.93
VPS13AQ96RL7 AC008638.3-201ENST00000603341 463 ntBASIC3.01□□□□□ -1.93
VPS13AQ96RL7 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VPS13AQ96RL7 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
VPS13AQ96RL7 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VPS13AQ96RL7 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
VPS13AQ96RL7 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
VPS13AQ96RL7 SNORD15B-201ENST00000384714 146 ntBASIC3.01□□□□□ -1.93
VPS13AQ96RL7 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
VPS13AQ96RL7 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.01□□□□□ -1.93
VPS13AQ96RL7 RPL37P4-201ENST00000448908 268 ntBASIC3.01□□□□□ -1.93
VPS13AQ96RL7 AC112492.1-201ENST00000449607 712 ntBASIC3.01□□□□□ -1.93
VPS13AQ96RL7 RPS4XP6-201ENST00000477670 797 ntBASIC3.01□□□□□ -1.93
VPS13AQ96RL7 AP003122.3-201ENST00000526316 255 ntBASIC3.01□□□□□ -1.93
VPS13AQ96RL7 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
VPS13AQ96RL7 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.01□□□□□ -1.93
VPS13AQ96RL7 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.01□□□□□ -1.93
VPS13AQ96RL7 AC103710.3-201ENST00000608157 948 ntBASIC3.01□□□□□ -1.93
VPS13AQ96RL7 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.01□□□□□ -1.93
VPS13AQ96RL7 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.01□□□□□ -1.93
VPS13AQ96RL7 DCAF13P3-201ENST00000561147 1334 ntBASIC3.01□□□□□ -1.93
VPS13AQ96RL7 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
VPS13AQ96RL7 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
VPS13AQ96RL7 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VPS13AQ96RL7 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
VPS13AQ96RL7 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3□□□□□ -1.93
VPS13AQ96RL7 AL360182.1-201ENST00000397433 468 ntBASIC3□□□□□ -1.93
VPS13AQ96RL7 AL592148.1-201ENST00000413568 445 ntBASIC3□□□□□ -1.93
VPS13AQ96RL7 AL591806.2-201ENST00000433122 173 ntBASIC3□□□□□ -1.93
VPS13AQ96RL7 AC007563.3-201ENST00000433233 371 ntBASIC3□□□□□ -1.93
VPS13AQ96RL7 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3□□□□□ -1.93
VPS13AQ96RL7 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3□□□□□ -1.93
VPS13AQ96RL7 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3□□□□□ -1.93
VPS13AQ96RL7 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC3□□□□□ -1.93
VPS13AQ96RL7 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3□□□□□ -1.93
VPS13AQ96RL7 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC3□□□□□ -1.93
VPS13AQ96RL7 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC3□□□□□ -1.93
VPS13AQ96RL7 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
VPS13AQ96RL7 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
VPS13AQ96RL7 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
VPS13AQ96RL7 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
VPS13AQ96RL7 ELOCP23-201ENST00000452014 332 ntBASIC3□□□□□ -1.93
VPS13AQ96RL7 KLHL2P1-201ENST00000508691 521 ntBASIC3□□□□□ -1.93
VPS13AQ96RL7 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3□□□□□ -1.93
VPS13AQ96RL7 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms