Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC9.7□□□□□ -0.86
TRIM41Q8WV44 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC9.7□□□□□ -0.86
TRIM41Q8WV44 HSPE1P2-201ENST00000554777 306 ntBASIC9.7□□□□□ -0.86
TRIM41Q8WV44 DPPA3P2-202ENST00000557188 1219 ntBASIC9.7□□□□□ -0.86
TRIM41Q8WV44 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC9.7□□□□□ -0.86
TRIM41Q8WV44 AC093519.1-201ENST00000566109 298 ntBASIC9.7□□□□□ -0.86
TRIM41Q8WV44 MIR4742-201ENST00000581069 85 ntBASIC9.7□□□□□ -0.86
TRIM41Q8WV44 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC9.7□□□□□ -0.86
TRIM41Q8WV44 AC115621.1-201ENST00000604653 858 ntBASIC9.7□□□□□ -0.86
TRIM41Q8WV44 AC019193.3-201ENST00000609144 554 ntBASIC9.7□□□□□ -0.86
TRIM41Q8WV44 AC233309.1-201ENST00000619522 751 ntBASIC9.7□□□□□ -0.86
TRIM41Q8WV44 MIR7703-201ENST00000620784 77 ntBASIC9.7□□□□□ -0.86
TRIM41Q8WV44 AC040168.1-201ENST00000623594 991 ntBASIC9.7□□□□□ -0.86
TRIM41Q8WV44 AC132068.1-201ENST00000623805 459 ntBASIC9.7□□□□□ -0.86
TRIM41Q8WV44 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TRIM41Q8WV44 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TRIM41Q8WV44 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
TRIM41Q8WV44 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TRIM41Q8WV44 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TRIM41Q8WV44 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
TRIM41Q8WV44 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC9.7□□□□□ -0.86
TRIM41Q8WV44 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC9.7□□□□□ -0.86
TRIM41Q8WV44 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
TRIM41Q8WV44 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TRIM41Q8WV44 FHIT-201ENST00000341848 174 ntTSL 3 BASIC9.69□□□□□ -0.86
TRIM41Q8WV44 OR52E6-202ENST00000379946 954 ntBASIC9.69□□□□□ -0.86
TRIM41Q8WV44 SNORD115.1-201ENST00000391109 76 ntBASIC9.69□□□□□ -0.86
TRIM41Q8WV44 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TRIM41Q8WV44 RPL23AP17-201ENST00000401064 499 ntBASIC9.69□□□□□ -0.86
TRIM41Q8WV44 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC9.69□□□□□ -0.86
TRIM41Q8WV44 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC9.69□□□□□ -0.86
TRIM41Q8WV44 RNU1-88P-201ENST00000459274 128 ntBASIC9.69□□□□□ -0.86
TRIM41Q8WV44 MTND4P17-201ENST00000470444 350 ntBASIC9.69□□□□□ -0.86
TRIM41Q8WV44 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TRIM41Q8WV44 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC9.69□□□□□ -0.86
TRIM41Q8WV44 Vault.3-201ENST00000516676 95 ntBASIC9.69□□□□□ -0.86
TRIM41Q8WV44 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
TRIM41Q8WV44 AC027309.2-201ENST00000520566 192 ntBASIC9.69□□□□□ -0.86
TRIM41Q8WV44 COX6CP5-201ENST00000527162 228 ntBASIC9.69□□□□□ -0.86
TRIM41Q8WV44 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC9.69□□□□□ -0.86
TRIM41Q8WV44 ARL6IP1P1-201ENST00000545836 610 ntBASIC9.69□□□□□ -0.86
TRIM41Q8WV44 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC9.69□□□□□ -0.86
TRIM41Q8WV44 MIR4503-201ENST00000582187 83 ntBASIC9.69□□□□□ -0.86
TRIM41Q8WV44 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC9.69□□□□□ -0.86
TRIM41Q8WV44 MTND4P35-201ENST00000604257 1375 ntBASIC9.69□□□□□ -0.86
TRIM41Q8WV44 RNU6-87P-201ENST00000607561 108 ntBASIC9.69□□□□□ -0.86
TRIM41Q8WV44 AL355472.4-201ENST00000610233 626 ntBASIC9.69□□□□□ -0.86
TRIM41Q8WV44 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC9.69□□□□□ -0.86
TRIM41Q8WV44 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC9.69□□□□□ -0.86
TRIM41Q8WV44 UBA3-213ENST00000631029 123 ntTSL 5 BASIC9.69□□□□□ -0.86
TRIM41Q8WV44 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC9.69□□□□□ -0.86
TRIM41Q8WV44 DMD-205ENST00000359836 7339 ntTSL 5 BASIC9.69□□□□□ -0.86
TRIM41Q8WV44 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TRIM41Q8WV44 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC9.69□□□□□ -0.86
TRIM41Q8WV44 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC9.68□□□□□ -0.86
TRIM41Q8WV44 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TRIM41Q8WV44 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TRIM41Q8WV44 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
TRIM41Q8WV44 SNORD1C-201ENST00000363315 78 ntBASIC9.68□□□□□ -0.86
TRIM41Q8WV44 AL451142.1-201ENST00000375867 775 ntBASIC9.68□□□□□ -0.86
TRIM41Q8WV44 MRPL42P2-201ENST00000403169 426 ntBASIC9.68□□□□□ -0.86
TRIM41Q8WV44 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC9.68□□□□□ -0.86
TRIM41Q8WV44 RNU2-8P-201ENST00000410727 190 ntBASIC9.68□□□□□ -0.86
TRIM41Q8WV44 AC073264.1-201ENST00000411508 416 ntBASIC9.68□□□□□ -0.86
TRIM41Q8WV44 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC9.68□□□□□ -0.86
TRIM41Q8WV44 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC9.68□□□□□ -0.86
TRIM41Q8WV44 SETP9-201ENST00000423837 832 ntBASIC9.68□□□□□ -0.86
TRIM41Q8WV44 RPL7P4-203ENST00000430239 730 ntBASIC9.68□□□□□ -0.86
TRIM41Q8WV44 TXNP5-201ENST00000441043 315 ntBASIC9.68□□□□□ -0.86
TRIM41Q8WV44 MTCO1P27-201ENST00000448269 226 ntBASIC9.68□□□□□ -0.86
TRIM41Q8WV44 RPS27AP17-201ENST00000463344 455 ntBASIC9.68□□□□□ -0.86
TRIM41Q8WV44 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TRIM41Q8WV44 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC9.68□□□□□ -0.86
TRIM41Q8WV44 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC9.68□□□□□ -0.86
TRIM41Q8WV44 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TRIM41Q8WV44 AC018630.1-201ENST00000541376 925 ntBASIC9.68□□□□□ -0.86
TRIM41Q8WV44 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC9.68□□□□□ -0.86
TRIM41Q8WV44 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC9.68□□□□□ -0.86
TRIM41Q8WV44 MIR3149-201ENST00000584629 83 ntBASIC9.68□□□□□ -0.86
TRIM41Q8WV44 AC243773.3-201ENST00000613270 256 ntBASIC9.68□□□□□ -0.86
TRIM41Q8WV44 ATM-228ENST00000639240 498 ntTSL 5 BASIC9.68□□□□□ -0.86
TRIM41Q8WV44 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
TRIM41Q8WV44 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
TRIM41Q8WV44 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TRIM41Q8WV44 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC9.68□□□□□ -0.86
TRIM41Q8WV44 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TRIM41Q8WV44 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TRIM41Q8WV44 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TRIM41Q8WV44 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC9.68□□□□□ -0.86
TRIM41Q8WV44 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
TRIM41Q8WV44 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
TRIM41Q8WV44 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
TRIM41Q8WV44 OR11H5P-202ENST00000641612 1325 ntBASIC9.67□□□□□ -0.86
TRIM41Q8WV44 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
TRIM41Q8WV44 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
TRIM41Q8WV44 RNU6-525P-201ENST00000363685 104 ntBASIC9.67□□□□□ -0.86
TRIM41Q8WV44 RNU6-289P-201ENST00000364093 107 ntBASIC9.67□□□□□ -0.86
TRIM41Q8WV44 SNORA70.4-201ENST00000365509 134 ntBASIC9.67□□□□□ -0.86
TRIM41Q8WV44 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC9.67□□□□□ -0.86
TRIM41Q8WV44 RNU6-769P-201ENST00000384407 104 ntBASIC9.67□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms