Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
EFNB3Q15768 RNA5SP391-201ENST00000363456 119 ntBASIC4.05□□□□□ -1.76
EFNB3Q15768 RNA5SP397-201ENST00000391323 118 ntBASIC4.05□□□□□ -1.76
EFNB3Q15768 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.05□□□□□ -1.76
EFNB3Q15768 AL450338.1-201ENST00000407987 512 ntBASIC4.05□□□□□ -1.76
EFNB3Q15768 RN7SKP106-201ENST00000410832 272 ntBASIC4.05□□□□□ -1.76
EFNB3Q15768 PIGPP2-201ENST00000411569 458 ntBASIC4.05□□□□□ -1.76
EFNB3Q15768 USP9YP33-201ENST00000412220 421 ntBASIC4.05□□□□□ -1.76
EFNB3Q15768 ATG4AP1-201ENST00000416893 538 ntBASIC4.05□□□□□ -1.76
EFNB3Q15768 SDCBPP2-201ENST00000424643 885 ntBASIC4.05□□□□□ -1.76
EFNB3Q15768 NIPA2P1-201ENST00000426223 976 ntBASIC4.05□□□□□ -1.76
EFNB3Q15768 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
EFNB3Q15768 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.05□□□□□ -1.76
EFNB3Q15768 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
EFNB3Q15768 USP9YP35-201ENST00000435696 412 ntBASIC4.05□□□□□ -1.76
EFNB3Q15768 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.05□□□□□ -1.76
EFNB3Q15768 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
EFNB3Q15768 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.05□□□□□ -1.76
EFNB3Q15768 H2AFZP5-201ENST00000446960 382 ntBASIC4.05□□□□□ -1.76
EFNB3Q15768 RPL26P28-201ENST00000451325 435 ntBASIC4.05□□□□□ -1.76
EFNB3Q15768 USP9YP10-201ENST00000454868 628 ntBASIC4.05□□□□□ -1.76
EFNB3Q15768 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.05□□□□□ -1.76
EFNB3Q15768 MTND2P28-201ENST00000457540 1044 ntBASIC4.05□□□□□ -1.76
EFNB3Q15768 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.05□□□□□ -1.76
EFNB3Q15768 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.05□□□□□ -1.76
EFNB3Q15768 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.05□□□□□ -1.76
EFNB3Q15768 RPL12P20-201ENST00000475538 479 ntBASIC4.05□□□□□ -1.76
EFNB3Q15768 AC112198.1-201ENST00000505369 1220 ntBASIC4.05□□□□□ -1.76
EFNB3Q15768 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.05□□□□□ -1.76
EFNB3Q15768 HMGB3P13-201ENST00000511263 607 ntBASIC4.05□□□□□ -1.76
EFNB3Q15768 USP9YP5-201ENST00000511770 630 ntBASIC4.05□□□□□ -1.76
EFNB3Q15768 RNY4P37-201ENST00000516225 96 ntBASIC4.05□□□□□ -1.76
EFNB3Q15768 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.05□□□□□ -1.76
EFNB3Q15768 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.05□□□□□ -1.76
EFNB3Q15768 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.05□□□□□ -1.76
EFNB3Q15768 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
EFNB3Q15768 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.05□□□□□ -1.76
EFNB3Q15768 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.05□□□□□ -1.76
EFNB3Q15768 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.05□□□□□ -1.76
EFNB3Q15768 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.05□□□□□ -1.76
EFNB3Q15768 AL031985.2-201ENST00000600955 480 ntBASIC4.05□□□□□ -1.76
EFNB3Q15768 AP001521.1-201ENST00000609150 300 ntBASIC4.05□□□□□ -1.76
EFNB3Q15768 AC008083.4-201ENST00000615076 444 ntBASIC4.05□□□□□ -1.76
EFNB3Q15768 AC007494.3-201ENST00000624660 743 ntBASIC4.05□□□□□ -1.76
EFNB3Q15768 MIR7641-1-201ENST00000627518 61 ntBASIC4.05□□□□□ -1.76
EFNB3Q15768 AC127502.3-201ENST00000636170 1206 ntBASIC4.05□□□□□ -1.76
EFNB3Q15768 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
EFNB3Q15768 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
EFNB3Q15768 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
EFNB3Q15768 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
EFNB3Q15768 AL356489.2-201ENST00000566968 3528 ntBASIC4.05□□□□□ -1.76
EFNB3Q15768 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
EFNB3Q15768 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
EFNB3Q15768 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
EFNB3Q15768 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
EFNB3Q15768 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.05□□□□□ -1.76
EFNB3Q15768 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
EFNB3Q15768 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
EFNB3Q15768 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.04□□□□□ -1.76
EFNB3Q15768 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
EFNB3Q15768 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
EFNB3Q15768 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
EFNB3Q15768 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.04□□□□□ -1.76
EFNB3Q15768 RNU6-500P-201ENST00000362349 107 ntBASIC4.04□□□□□ -1.76
EFNB3Q15768 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.04□□□□□ -1.76
EFNB3Q15768 SNORD113.2-201ENST00000364166 89 ntBASIC4.04□□□□□ -1.76
EFNB3Q15768 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.04□□□□□ -1.76
EFNB3Q15768 RNU6-921P-201ENST00000384361 107 ntBASIC4.04□□□□□ -1.76
EFNB3Q15768 RNU6-441P-201ENST00000384545 106 ntBASIC4.04□□□□□ -1.76
EFNB3Q15768 Y_RNA.560-201ENST00000384689 102 ntBASIC4.04□□□□□ -1.76
EFNB3Q15768 RPL23AP29-201ENST00000397284 453 ntBASIC4.04□□□□□ -1.76
EFNB3Q15768 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.04□□□□□ -1.76
EFNB3Q15768 AL049697.2-201ENST00000403708 294 ntBASIC4.04□□□□□ -1.76
EFNB3Q15768 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
EFNB3Q15768 AC073264.1-201ENST00000411508 416 ntBASIC4.04□□□□□ -1.76
EFNB3Q15768 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.04□□□□□ -1.76
EFNB3Q15768 MTCYBP38-201ENST00000417160 1123 ntBASIC4.04□□□□□ -1.76
EFNB3Q15768 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.04□□□□□ -1.76
EFNB3Q15768 AC140479.3-201ENST00000418944 1126 ntBASIC4.04□□□□□ -1.76
EFNB3Q15768 AC012519.1-201ENST00000424588 610 ntBASIC4.04□□□□□ -1.76
EFNB3Q15768 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.04□□□□□ -1.76
EFNB3Q15768 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.04□□□□□ -1.76
EFNB3Q15768 VN1R108P-201ENST00000431580 830 ntBASIC4.04□□□□□ -1.76
EFNB3Q15768 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.04□□□□□ -1.76
EFNB3Q15768 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.04□□□□□ -1.76
EFNB3Q15768 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.04□□□□□ -1.76
EFNB3Q15768 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.04□□□□□ -1.76
EFNB3Q15768 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.04□□□□□ -1.76
EFNB3Q15768 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.04□□□□□ -1.76
EFNB3Q15768 AL162591.2-201ENST00000449634 317 ntBASIC4.04□□□□□ -1.76
EFNB3Q15768 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.04□□□□□ -1.76
EFNB3Q15768 MTCO3P16-201ENST00000454456 754 ntBASIC4.04□□□□□ -1.76
EFNB3Q15768 AC010301.1-201ENST00000473936 355 ntBASIC4.04□□□□□ -1.76
EFNB3Q15768 RN7SL346P-201ENST00000491561 294 ntBASIC4.04□□□□□ -1.76
EFNB3Q15768 CEACAMP10-202ENST00000495431 496 ntBASIC4.04□□□□□ -1.76
EFNB3Q15768 AC025164.1-201ENST00000496249 478 ntBASIC4.04□□□□□ -1.76
EFNB3Q15768 AC108078.3-201ENST00000502633 489 ntBASIC4.04□□□□□ -1.76
EFNB3Q15768 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.04□□□□□ -1.76
EFNB3Q15768 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
EFNB3Q15768 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms