Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 USP9YP36-201ENST00000424581 829 ntBASIC4.7□□□□□ -1.66
CLRN1P58418 AL031736.2-201ENST00000426573 787 ntBASIC4.7□□□□□ -1.66
CLRN1P58418 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.7□□□□□ -1.66
CLRN1P58418 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.7□□□□□ -1.66
CLRN1P58418 AL161722.2-201ENST00000434731 981 ntBASIC4.7□□□□□ -1.66
CLRN1P58418 RPL12P18-201ENST00000437175 325 ntBASIC4.7□□□□□ -1.66
CLRN1P58418 CYCSP12-201ENST00000437729 300 ntBASIC4.7□□□□□ -1.66
CLRN1P58418 GAPDHP58-201ENST00000438477 1006 ntBASIC4.7□□□□□ -1.66
CLRN1P58418 AC092013.1-201ENST00000438795 332 ntBASIC4.7□□□□□ -1.66
CLRN1P58418 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.7□□□□□ -1.66
CLRN1P58418 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.7□□□□□ -1.66
CLRN1P58418 AC104634.1-201ENST00000452720 462 ntBASIC4.7□□□□□ -1.66
CLRN1P58418 AC090453.1-201ENST00000495560 436 ntBASIC4.7□□□□□ -1.66
CLRN1P58418 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.7□□□□□ -1.66
CLRN1P58418 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.7□□□□□ -1.66
CLRN1P58418 RNU2-46P-201ENST00000517038 113 ntBASIC4.7□□□□□ -1.66
CLRN1P58418 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.7□□□□□ -1.66
CLRN1P58418 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.7□□□□□ -1.66
CLRN1P58418 HSPA8P13-201ENST00000523715 472 ntBASIC4.7□□□□□ -1.66
CLRN1P58418 AP003122.4-201ENST00000530980 758 ntBASIC4.7□□□□□ -1.66
CLRN1P58418 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.7□□□□□ -1.66
CLRN1P58418 AL157394.1-201ENST00000562983 1224 ntBASIC4.7□□□□□ -1.66
CLRN1P58418 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.7□□□□□ -1.66
CLRN1P58418 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CLRN1P58418 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.7□□□□□ -1.66
CLRN1P58418 AC006504.3-201ENST00000586818 523 ntBASIC4.7□□□□□ -1.66
CLRN1P58418 HMGN1P30-201ENST00000589286 268 ntBASIC4.7□□□□□ -1.66
CLRN1P58418 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.7□□□□□ -1.66
CLRN1P58418 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.7□□□□□ -1.66
CLRN1P58418 AC009704.2-201ENST00000618739 483 ntBASIC4.7□□□□□ -1.66
CLRN1P58418 SNORA11.6-201ENST00000619030 128 ntBASIC4.7□□□□□ -1.66
CLRN1P58418 RNU6-156P-201ENST00000621869 107 ntBASIC4.7□□□□□ -1.66
CLRN1P58418 AL359880.1-201ENST00000621879 266 ntBASIC4.7□□□□□ -1.66
CLRN1P58418 AC005609.4-201ENST00000625071 447 ntBASIC4.7□□□□□ -1.66
CLRN1P58418 PISRT1-201ENST00000626175 531 ntBASIC4.7□□□□□ -1.66
CLRN1P58418 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.7□□□□□ -1.66
CLRN1P58418 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CLRN1P58418 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CLRN1P58418 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CLRN1P58418 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CLRN1P58418 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLRN1P58418 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.7□□□□□ -1.66
CLRN1P58418 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLRN1P58418 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLRN1P58418 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLRN1P58418 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLRN1P58418 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLRN1P58418 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLRN1P58418 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLRN1P58418 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CLRN1P58418 OR9K1P-201ENST00000326513 941 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 U8.3-201ENST00000363321 132 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 RNA5SP391-201ENST00000363456 119 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.69□□□□□ -1.66
CLRN1P58418 Y_RNA.453-201ENST00000384223 109 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 RNA5SP187-201ENST00000384400 119 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 MIR143-201ENST00000385300 106 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CLRN1P58418 SNORD115.1-201ENST00000391109 76 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
CLRN1P58418 AL031679.1-201ENST00000400616 525 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 AC009804.1-201ENST00000400949 179 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 MTCO1P17-201ENST00000411522 491 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 RPL6P29-201ENST00000414863 865 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 GNG5P5-201ENST00000420444 220 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.69□□□□□ -1.66
CLRN1P58418 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.69□□□□□ -1.66
CLRN1P58418 AL109913.1-201ENST00000421173 514 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CLRN1P58418 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.69□□□□□ -1.66
CLRN1P58418 AC096632.1-201ENST00000427395 310 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 ISCA1P6-201ENST00000427740 390 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.69□□□□□ -1.66
CLRN1P58418 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.69□□□□□ -1.66
CLRN1P58418 RPS3AP54-201ENST00000435535 734 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 HMGB1P31-201ENST00000437242 427 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.69□□□□□ -1.66
CLRN1P58418 RPL22P17-201ENST00000438729 315 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 CEACAMP9-201ENST00000442990 513 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 AC002381.1-201ENST00000447049 280 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 AP000542.1-201ENST00000448473 371 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 SBDSP1-204ENST00000453858 737 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.69□□□□□ -1.66
CLRN1P58418 AL035090.1-201ENST00000454835 332 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 MTCO3P20-201ENST00000454926 688 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.69□□□□□ -1.66
CLRN1P58418 RPS3AP14-201ENST00000483907 780 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.69□□□□□ -1.66
CLRN1P58418 MTND1P3-201ENST00000484956 952 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 HMGB1P36-201ENST00000487709 576 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 RN7SL184P-201ENST00000488308 297 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 AC009646.1-201ENST00000510455 318 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.69□□□□□ -1.66
CLRN1P58418 RNU6-1003P-201ENST00000517099 105 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.69□□□□□ -1.66
CLRN1P58418 CENPUP2-201ENST00000555897 1186 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 AL390334.1-201ENST00000556395 450 ntBASIC4.69□□□□□ -1.66
CLRN1P58418 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.69□□□□□ -1.66
CLRN1P58418 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms