Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.56□□□□□ -1.84
CLDN6P56747 HMGB1P5-202ENST00000451497 985 ntBASIC3.56□□□□□ -1.84
CLDN6P56747 SUMO1P1-201ENST00000497904 306 ntBASIC3.56□□□□□ -1.84
CLDN6P56747 HMGB1P21-201ENST00000502313 581 ntBASIC3.56□□□□□ -1.84
CLDN6P56747 RPL23AP94-201ENST00000512518 302 ntBASIC3.56□□□□□ -1.84
CLDN6P56747 AC018797.3-201ENST00000513388 1241 ntBASIC3.56□□□□□ -1.84
CLDN6P56747 RN7SKP82-201ENST00000516786 223 ntBASIC3.56□□□□□ -1.84
CLDN6P56747 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.56□□□□□ -1.84
CLDN6P56747 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.56□□□□□ -1.84
CLDN6P56747 AC024224.1-201ENST00000538284 609 ntBASIC3.56□□□□□ -1.84
CLDN6P56747 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.56□□□□□ -1.84
CLDN6P56747 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.56□□□□□ -1.84
CLDN6P56747 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.56□□□□□ -1.84
CLDN6P56747 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN6P56747 AL354760.1-201ENST00000608357 643 ntBASIC3.56□□□□□ -1.84
CLDN6P56747 AP000255.1-201ENST00000610276 676 ntBASIC3.56□□□□□ -1.84
CLDN6P56747 LINC00216-201ENST00000623548 1126 ntBASIC3.56□□□□□ -1.84
CLDN6P56747 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.56□□□□□ -1.84
CLDN6P56747 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN6P56747 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN6P56747 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN6P56747 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN6P56747 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.56□□□□□ -1.84
CLDN6P56747 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLDN6P56747 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLDN6P56747 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLDN6P56747 AL365440.1-201ENST00000436135 2167 ntBASIC3.55□□□□□ -1.84
CLDN6P56747 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLDN6P56747 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLDN6P56747 RN7SKP56-201ENST00000410513 331 ntBASIC3.55□□□□□ -1.84
CLDN6P56747 AC096664.2-201ENST00000411843 406 ntBASIC3.55□□□□□ -1.84
CLDN6P56747 BX323014.1-201ENST00000412876 237 ntBASIC3.55□□□□□ -1.84
CLDN6P56747 RPS7P15-201ENST00000415804 584 ntBASIC3.55□□□□□ -1.84
CLDN6P56747 HSFY4P-201ENST00000415994 1181 ntBASIC3.55□□□□□ -1.84
CLDN6P56747 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.55□□□□□ -1.84
CLDN6P56747 AC105402.2-201ENST00000438503 358 ntBASIC3.55□□□□□ -1.84
CLDN6P56747 AL591503.2-201ENST00000442314 1005 ntBASIC3.55□□□□□ -1.84
CLDN6P56747 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.55□□□□□ -1.84
CLDN6P56747 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.55□□□□□ -1.84
CLDN6P56747 AC017015.1-201ENST00000477387 286 ntBASIC3.55□□□□□ -1.84
CLDN6P56747 AC090543.1-201ENST00000492168 485 ntBASIC3.55□□□□□ -1.84
CLDN6P56747 RPL7P24-201ENST00000493052 752 ntBASIC3.55□□□□□ -1.84
CLDN6P56747 AC012170.1-201ENST00000495139 359 ntBASIC3.55□□□□□ -1.84
CLDN6P56747 OR52A4P-203ENST00000498233 1014 ntBASIC3.55□□□□□ -1.84
CLDN6P56747 RN7SKP289-201ENST00000517244 295 ntBASIC3.55□□□□□ -1.84
CLDN6P56747 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.55□□□□□ -1.84
CLDN6P56747 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.55□□□□□ -1.84
CLDN6P56747 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.55□□□□□ -1.84
CLDN6P56747 AP002812.4-201ENST00000532139 286 ntBASIC3.55□□□□□ -1.84
CLDN6P56747 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.55□□□□□ -1.84
CLDN6P56747 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.55□□□□□ -1.84
CLDN6P56747 NCAPGP2-201ENST00000557911 754 ntBASIC3.55□□□□□ -1.84
CLDN6P56747 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.55□□□□□ -1.84
CLDN6P56747 AC020914.4-201ENST00000597690 277 ntBASIC3.55□□□□□ -1.84
CLDN6P56747 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.55□□□□□ -1.84
CLDN6P56747 AL137843.1-201ENST00000605078 385 ntBASIC3.55□□□□□ -1.84
CLDN6P56747 AP003117.2-201ENST00000606010 545 ntBASIC3.55□□□□□ -1.84
CLDN6P56747 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.55□□□□□ -1.84
CLDN6P56747 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.55□□□□□ -1.84
CLDN6P56747 AL365361.1-201ENST00000566942 3481 ntBASIC3.55□□□□□ -1.84
CLDN6P56747 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.55□□□□□ -1.84
CLDN6P56747 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.55□□□□□ -1.84
CLDN6P56747 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.55□□□□□ -1.84
CLDN6P56747 AC025125.1-201ENST00000624743 1922 ntBASIC3.54□□□□□ -1.84
CLDN6P56747 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.54□□□□□ -1.84
CLDN6P56747 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLDN6P56747 AC017007.4-201ENST00000503353 1352 ntBASIC3.54□□□□□ -1.84
CLDN6P56747 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLDN6P56747 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
CLDN6P56747 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLDN6P56747 AL590290.1-201ENST00000405336 380 ntBASIC3.54□□□□□ -1.84
CLDN6P56747 AC004987.3-201ENST00000413879 771 ntBASIC3.54□□□□□ -1.84
CLDN6P56747 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.54□□□□□ -1.84
CLDN6P56747 ELOCP6-201ENST00000429066 328 ntBASIC3.54□□□□□ -1.84
CLDN6P56747 AC005326.1-201ENST00000429197 123 ntBASIC3.54□□□□□ -1.84
CLDN6P56747 AC087650.1-201ENST00000431445 468 ntBASIC3.54□□□□□ -1.84
CLDN6P56747 AL645931.1-201ENST00000439737 410 ntBASIC3.54□□□□□ -1.84
CLDN6P56747 AL353093.1-201ENST00000441292 436 ntBASIC3.54□□□□□ -1.84
CLDN6P56747 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.54□□□□□ -1.84
CLDN6P56747 TPTE2P6-202ENST00000445572 1007 ntBASIC3.54□□□□□ -1.84
CLDN6P56747 ELOCP12-201ENST00000458706 328 ntBASIC3.54□□□□□ -1.84
CLDN6P56747 AC069499.1-201ENST00000489433 509 ntBASIC3.54□□□□□ -1.84
CLDN6P56747 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLDN6P56747 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.54□□□□□ -1.84
CLDN6P56747 IGKV2-36-201ENST00000519999 223 ntBASIC3.54□□□□□ -1.84
CLDN6P56747 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.54□□□□□ -1.84
CLDN6P56747 PTP4A1P6-201ENST00000531034 478 ntBASIC3.54□□□□□ -1.84
CLDN6P56747 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.54□□□□□ -1.84
CLDN6P56747 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.54□□□□□ -1.84
CLDN6P56747 AC007424.1-203ENST00000554613 687 ntBASIC3.54□□□□□ -1.84
CLDN6P56747 GNRHR2P1-201ENST00000555315 631 ntBASIC3.54□□□□□ -1.84
CLDN6P56747 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.54□□□□□ -1.84
CLDN6P56747 AL360157.1-201ENST00000565962 87 ntBASIC3.54□□□□□ -1.84
CLDN6P56747 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.54□□□□□ -1.84
CLDN6P56747 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.54□□□□□ -1.84
CLDN6P56747 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.54□□□□□ -1.84
CLDN6P56747 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.54□□□□□ -1.84
CLDN6P56747 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.54□□□□□ -1.84
CLDN6P56747 AL133247.2-201ENST00000603236 482 ntBASIC3.54□□□□□ -1.84
CLDN6P56747 AC110792.4-201ENST00000609843 298 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms