Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 SFR1P1-201ENST00000403720 688 ntBASIC4.58□□□□□ -1.68
HDAC4P56524 PRELID3BP11-201ENST00000414230 479 ntBASIC4.58□□□□□ -1.68
HDAC4P56524 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.58□□□□□ -1.68
HDAC4P56524 AC107081.1-201ENST00000414975 361 ntBASIC4.58□□□□□ -1.68
HDAC4P56524 AC004552.1-201ENST00000419089 348 ntBASIC4.58□□□□□ -1.68
HDAC4P56524 AL356387.2-201ENST00000422272 243 ntBASIC4.58□□□□□ -1.68
HDAC4P56524 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.58□□□□□ -1.68
HDAC4P56524 MTCO1P3-201ENST00000429327 192 ntBASIC4.58□□□□□ -1.68
HDAC4P56524 RPL37P1-201ENST00000432310 284 ntBASIC4.58□□□□□ -1.68
HDAC4P56524 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.58□□□□□ -1.68
HDAC4P56524 MTCYBP31-201ENST00000438855 1122 ntBASIC4.58□□□□□ -1.68
HDAC4P56524 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.58□□□□□ -1.68
HDAC4P56524 AC239367.2-201ENST00000447309 705 ntBASIC4.58□□□□□ -1.68
HDAC4P56524 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.58□□□□□ -1.68
HDAC4P56524 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.58□□□□□ -1.68
HDAC4P56524 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.58□□□□□ -1.68
HDAC4P56524 RPS26P3-201ENST00000470205 348 ntBASIC4.58□□□□□ -1.68
HDAC4P56524 AC090543.2-201ENST00000483963 348 ntBASIC4.58□□□□□ -1.68
HDAC4P56524 AC004057.1-201ENST00000485827 348 ntBASIC4.58□□□□□ -1.68
HDAC4P56524 RPS27P23-201ENST00000487608 251 ntBASIC4.58□□□□□ -1.68
HDAC4P56524 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.58□□□□□ -1.68
HDAC4P56524 AC084024.2-201ENST00000503480 791 ntBASIC4.58□□□□□ -1.68
HDAC4P56524 AC093534.1-201ENST00000504977 132 ntBASIC4.58□□□□□ -1.68
HDAC4P56524 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.58□□□□□ -1.68
HDAC4P56524 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.58□□□□□ -1.68
HDAC4P56524 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.58□□□□□ -1.68
HDAC4P56524 UBTFL10-201ENST00000528532 562 ntBASIC4.58□□□□□ -1.68
HDAC4P56524 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.58□□□□□ -1.68
HDAC4P56524 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.58□□□□□ -1.68
HDAC4P56524 MTND6P33-201ENST00000571794 183 ntBASIC4.58□□□□□ -1.68
HDAC4P56524 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.58□□□□□ -1.68
HDAC4P56524 MIR5096-201ENST00000583713 70 ntBASIC4.58□□□□□ -1.68
HDAC4P56524 BNIP3P33-201ENST00000598912 569 ntBASIC4.58□□□□□ -1.68
HDAC4P56524 AC008638.3-201ENST00000603341 463 ntBASIC4.58□□□□□ -1.68
HDAC4P56524 AC007349.4-201ENST00000608114 532 ntBASIC4.58□□□□□ -1.68
HDAC4P56524 AC092653.1-201ENST00000608509 531 ntBASIC4.58□□□□□ -1.68
HDAC4P56524 AP004247.3-201ENST00000608682 624 ntBASIC4.58□□□□□ -1.68
HDAC4P56524 AC092954.1-201ENST00000609121 445 ntBASIC4.58□□□□□ -1.68
HDAC4P56524 AC024257.5-201ENST00000612739 531 ntBASIC4.58□□□□□ -1.68
HDAC4P56524 MIR6758-201ENST00000620653 63 ntBASIC4.58□□□□□ -1.68
HDAC4P56524 AP003485.2-201ENST00000623636 610 ntBASIC4.58□□□□□ -1.68
HDAC4P56524 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.58□□□□□ -1.68
HDAC4P56524 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.58□□□□□ -1.68
HDAC4P56524 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HDAC4P56524 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.58□□□□□ -1.68
HDAC4P56524 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HDAC4P56524 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HDAC4P56524 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HDAC4P56524 AL031985.3-201ENST00000565390 2449 ntBASIC4.57□□□□□ -1.68
HDAC4P56524 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HDAC4P56524 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
HDAC4P56524 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
HDAC4P56524 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HDAC4P56524 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HDAC4P56524 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HDAC4P56524 snoZ40.1-201ENST00000364540 72 ntBASIC4.57□□□□□ -1.68
HDAC4P56524 RNU6-619P-201ENST00000365146 108 ntBASIC4.57□□□□□ -1.68
HDAC4P56524 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.57□□□□□ -1.68
HDAC4P56524 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HDAC4P56524 AC119751.3-201ENST00000399720 670 ntBASIC4.57□□□□□ -1.68
HDAC4P56524 TMSB4XP8-201ENST00000402089 135 ntBASIC4.57□□□□□ -1.68
HDAC4P56524 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.57□□□□□ -1.68
HDAC4P56524 TMSB4XP6-201ENST00000415187 135 ntBASIC4.57□□□□□ -1.68
HDAC4P56524 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.57□□□□□ -1.68
HDAC4P56524 P2RY10P2-201ENST00000416730 913 ntBASIC4.57□□□□□ -1.68
HDAC4P56524 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.57□□□□□ -1.68
HDAC4P56524 RPS27AP7-201ENST00000422792 455 ntBASIC4.57□□□□□ -1.68
HDAC4P56524 TMSB4XP1-201ENST00000424567 135 ntBASIC4.57□□□□□ -1.68
HDAC4P56524 SKP1P3-201ENST00000429280 487 ntBASIC4.57□□□□□ -1.68
HDAC4P56524 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.57□□□□□ -1.68
HDAC4P56524 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.57□□□□□ -1.68
HDAC4P56524 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.57□□□□□ -1.68
HDAC4P56524 HMGB1P48-201ENST00000446155 598 ntBASIC4.57□□□□□ -1.68
HDAC4P56524 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.57□□□□□ -1.68
HDAC4P56524 PTENP1-201ENST00000447117 1215 ntBASIC4.57□□□□□ -1.68
HDAC4P56524 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.57□□□□□ -1.68
HDAC4P56524 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.57□□□□□ -1.68
HDAC4P56524 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.57□□□□□ -1.68
HDAC4P56524 RPS26P28-201ENST00000470806 348 ntBASIC4.57□□□□□ -1.68
HDAC4P56524 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HDAC4P56524 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.57□□□□□ -1.68
HDAC4P56524 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.57□□□□□ -1.68
HDAC4P56524 ATP1B1P1-201ENST00000509767 915 ntBASIC4.57□□□□□ -1.68
HDAC4P56524 AC110792.2-201ENST00000510278 224 ntBASIC4.57□□□□□ -1.68
HDAC4P56524 OR5H4P-201ENST00000510851 923 ntBASIC4.57□□□□□ -1.68
HDAC4P56524 RN7SKP82-201ENST00000516786 223 ntBASIC4.57□□□□□ -1.68
HDAC4P56524 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.57□□□□□ -1.68
HDAC4P56524 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.57□□□□□ -1.68
HDAC4P56524 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.57□□□□□ -1.68
HDAC4P56524 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.57□□□□□ -1.68
HDAC4P56524 AC023050.2-201ENST00000544968 387 ntBASIC4.57□□□□□ -1.68
HDAC4P56524 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.57□□□□□ -1.68
HDAC4P56524 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.57□□□□□ -1.68
HDAC4P56524 MIR1254-2-201ENST00000579553 63 ntBASIC4.57□□□□□ -1.68
HDAC4P56524 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
HDAC4P56524 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.57□□□□□ -1.68
HDAC4P56524 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.57□□□□□ -1.68
HDAC4P56524 AP001269.3-201ENST00000588718 329 ntBASIC4.57□□□□□ -1.68
HDAC4P56524 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.57□□□□□ -1.68
HDAC4P56524 AC091488.1-201ENST00000604239 660 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms