Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 CEACAMP6-201ENST00000452007 574 ntBASIC4.88□□□□□ -1.63
COPAP53621 AL645939.1-201ENST00000453429 797 ntBASIC4.88□□□□□ -1.63
COPAP53621 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.88□□□□□ -1.63
COPAP53621 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.88□□□□□ -1.63
COPAP53621 SYPL1P1-201ENST00000473622 768 ntBASIC4.88□□□□□ -1.63
COPAP53621 HMGB1P21-201ENST00000502313 581 ntBASIC4.88□□□□□ -1.63
COPAP53621 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.88□□□□□ -1.63
COPAP53621 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.88□□□□□ -1.63
COPAP53621 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.88□□□□□ -1.63
COPAP53621 RNA5SP497-201ENST00000516081 97 ntBASIC4.88□□□□□ -1.63
COPAP53621 HMGB1P19-201ENST00000517578 577 ntBASIC4.88□□□□□ -1.63
COPAP53621 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.88□□□□□ -1.63
COPAP53621 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.88□□□□□ -1.63
COPAP53621 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.88□□□□□ -1.63
COPAP53621 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.88□□□□□ -1.63
COPAP53621 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.88□□□□□ -1.63
COPAP53621 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.88□□□□□ -1.63
COPAP53621 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COPAP53621 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.88□□□□□ -1.63
COPAP53621 AL049839.1-201ENST00000556151 657 ntBASIC4.88□□□□□ -1.63
COPAP53621 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.88□□□□□ -1.63
COPAP53621 AC135628.1-201ENST00000568867 534 ntBASIC4.88□□□□□ -1.63
COPAP53621 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
COPAP53621 MIR4697-201ENST00000582977 78 ntBASIC4.88□□□□□ -1.63
COPAP53621 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COPAP53621 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
COPAP53621 AC091931.1-201ENST00000623488 728 ntBASIC4.88□□□□□ -1.63
COPAP53621 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.88□□□□□ -1.63
COPAP53621 AC073530.2-201ENST00000623987 261 ntBASIC4.88□□□□□ -1.63
COPAP53621 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.88□□□□□ -1.63
COPAP53621 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
COPAP53621 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
COPAP53621 AL445523.1-201ENST00000451184 1362 ntBASIC4.88□□□□□ -1.63
COPAP53621 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COPAP53621 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.88□□□□□ -1.63
COPAP53621 AL133412.1-201ENST00000380194 2992 ntBASIC4.88□□□□□ -1.63
COPAP53621 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COPAP53621 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
COPAP53621 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.87□□□□□ -1.63
COPAP53621 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
COPAP53621 AL356489.2-201ENST00000566968 3528 ntBASIC4.87□□□□□ -1.63
COPAP53621 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COPAP53621 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
COPAP53621 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COPAP53621 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
COPAP53621 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COPAP53621 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
COPAP53621 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.87□□□□□ -1.63
COPAP53621 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
COPAP53621 SNORA70F-201ENST00000384142 135 ntBASIC4.87□□□□□ -1.63
COPAP53621 RNU6-1200P-201ENST00000384162 107 ntBASIC4.87□□□□□ -1.63
COPAP53621 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
COPAP53621 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
COPAP53621 RPS24P12-201ENST00000402084 394 ntBASIC4.87□□□□□ -1.63
COPAP53621 AL049697.2-201ENST00000403708 294 ntBASIC4.87□□□□□ -1.63
COPAP53621 AC068533.2-201ENST00000411872 306 ntBASIC4.87□□□□□ -1.63
COPAP53621 TPT1P2-201ENST00000413105 503 ntBASIC4.87□□□□□ -1.63
COPAP53621 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.87□□□□□ -1.63
COPAP53621 AL645608.4-201ENST00000423619 154 ntBASIC4.87□□□□□ -1.63
COPAP53621 AL022400.1-201ENST00000423946 935 ntBASIC4.87□□□□□ -1.63
COPAP53621 FABP7P1-201ENST00000424004 391 ntBASIC4.87□□□□□ -1.63
COPAP53621 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.87□□□□□ -1.63
COPAP53621 AC016831.4-201ENST00000438302 307 ntBASIC4.87□□□□□ -1.63
COPAP53621 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.87□□□□□ -1.63
COPAP53621 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.87□□□□□ -1.63
COPAP53621 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.87□□□□□ -1.63
COPAP53621 RPL31P3-201ENST00000458430 332 ntBASIC4.87□□□□□ -1.63
COPAP53621 RN7SL517P-201ENST00000462240 305 ntBASIC4.87□□□□□ -1.63
COPAP53621 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.87□□□□□ -1.63
COPAP53621 MTND3P7-201ENST00000474435 343 ntBASIC4.87□□□□□ -1.63
COPAP53621 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.87□□□□□ -1.63
COPAP53621 AC013828.1-201ENST00000481845 158 ntBASIC4.87□□□□□ -1.63
COPAP53621 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.87□□□□□ -1.63
COPAP53621 ARL4AP1-201ENST00000503220 705 ntBASIC4.87□□□□□ -1.63
COPAP53621 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.87□□□□□ -1.63
COPAP53621 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.87□□□□□ -1.63
COPAP53621 HNRNPKP5-201ENST00000515300 253 ntBASIC4.87□□□□□ -1.63
COPAP53621 RNU2-30P-201ENST00000516209 141 ntBASIC4.87□□□□□ -1.63
COPAP53621 RNU6-759P-201ENST00000516740 103 ntBASIC4.87□□□□□ -1.63
COPAP53621 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.87□□□□□ -1.63
COPAP53621 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.87□□□□□ -1.63
COPAP53621 ARL2BPP5-201ENST00000523141 481 ntBASIC4.87□□□□□ -1.63
COPAP53621 MTCO1P49-201ENST00000523429 802 ntBASIC4.87□□□□□ -1.63
COPAP53621 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.87□□□□□ -1.63
COPAP53621 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.87□□□□□ -1.63
COPAP53621 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.87□□□□□ -1.63
COPAP53621 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.87□□□□□ -1.63
COPAP53621 AC074051.3-201ENST00000570238 358 ntBASIC4.87□□□□□ -1.63
COPAP53621 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.87□□□□□ -1.63
COPAP53621 RN7SL802P-201ENST00000577858 299 ntBASIC4.87□□□□□ -1.63
COPAP53621 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.87□□□□□ -1.63
COPAP53621 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.87□□□□□ -1.63
COPAP53621 AC006270.3-201ENST00000605967 1036 ntBASIC4.87□□□□□ -1.63
COPAP53621 AC019193.2-201ENST00000610012 634 ntBASIC4.87□□□□□ -1.63
COPAP53621 AC092140.2-201ENST00000618027 521 ntBASIC4.87□□□□□ -1.63
COPAP53621 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.87□□□□□ -1.63
COPAP53621 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
COPAP53621 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.87□□□□□ -1.63
COPAP53621 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.87□□□□□ -1.63
COPAP53621 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms