Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
ERCC3P19447 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
ERCC3P19447 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ERCC3P19447 AC011978.2-201ENST00000569835 2054 ntBASIC6.31□□□□□ -1.4
ERCC3P19447 MIR550A3-201ENST00000390735 95 ntBASIC6.31□□□□□ -1.4
ERCC3P19447 AL645733.1-201ENST00000402250 217 ntBASIC6.31□□□□□ -1.4
ERCC3P19447 RNU2-15P-201ENST00000410692 191 ntBASIC6.31□□□□□ -1.4
ERCC3P19447 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC6.31□□□□□ -1.4
ERCC3P19447 AC004690.1-201ENST00000418216 328 ntBASIC6.31□□□□□ -1.4
ERCC3P19447 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC6.31□□□□□ -1.4
ERCC3P19447 AC007161.1-204ENST00000423039 460 ntBASIC6.31□□□□□ -1.4
ERCC3P19447 SRSF1P1-201ENST00000424058 520 ntBASIC6.31□□□□□ -1.4
ERCC3P19447 AC008065.1-201ENST00000428525 348 ntBASIC6.31□□□□□ -1.4
ERCC3P19447 FCF1P1-201ENST00000432690 571 ntBASIC6.31□□□□□ -1.4
ERCC3P19447 KRT8P51-201ENST00000438938 274 ntBASIC6.31□□□□□ -1.4
ERCC3P19447 MTND6P18-201ENST00000439477 513 ntBASIC6.31□□□□□ -1.4
ERCC3P19447 PGBD4P3-201ENST00000440731 581 ntBASIC6.31□□□□□ -1.4
ERCC3P19447 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC6.31□□□□□ -1.4
ERCC3P19447 NPM1P49-201ENST00000448027 714 ntBASIC6.31□□□□□ -1.4
ERCC3P19447 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC6.31□□□□□ -1.4
ERCC3P19447 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.31□□□□□ -1.4
ERCC3P19447 AL389915.2-201ENST00000454576 441 ntBASIC6.31□□□□□ -1.4
ERCC3P19447 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC6.31□□□□□ -1.4
ERCC3P19447 AC087385.1-201ENST00000475062 312 ntBASIC6.31□□□□□ -1.4
ERCC3P19447 BX284632.1-201ENST00000478218 541 ntBASIC6.31□□□□□ -1.4
ERCC3P19447 AC109462.1-201ENST00000491087 368 ntBASIC6.31□□□□□ -1.4
ERCC3P19447 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
ERCC3P19447 TXNP6-201ENST00000510190 310 ntBASIC6.31□□□□□ -1.4
ERCC3P19447 RNU6-1003P-201ENST00000517099 105 ntBASIC6.31□□□□□ -1.4
ERCC3P19447 HMGB1P40-201ENST00000525121 540 ntBASIC6.31□□□□□ -1.4
ERCC3P19447 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.31□□□□□ -1.4
ERCC3P19447 AC105233.3-201ENST00000531125 744 ntBASIC6.31□□□□□ -1.4
ERCC3P19447 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC6.31□□□□□ -1.4
ERCC3P19447 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC6.31□□□□□ -1.4
ERCC3P19447 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC6.31□□□□□ -1.4
ERCC3P19447 ZNF519P2-201ENST00000557032 169 ntBASIC6.31□□□□□ -1.4
ERCC3P19447 AL391840.1-201ENST00000571144 367 ntBASIC6.31□□□□□ -1.4
ERCC3P19447 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.31□□□□□ -1.4
ERCC3P19447 AC090615.1-201ENST00000577519 154 ntBASIC6.31□□□□□ -1.4
ERCC3P19447 CKS1BP3-201ENST00000600888 237 ntBASIC6.31□□□□□ -1.4
ERCC3P19447 AC010857.1-201ENST00000606398 594 ntBASIC6.31□□□□□ -1.4
ERCC3P19447 AC133644.2-201ENST00000608142 540 ntBASIC6.31□□□□□ -1.4
ERCC3P19447 U4.5-201ENST00000617137 123 ntBASIC6.31□□□□□ -1.4
ERCC3P19447 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ERCC3P19447 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
ERCC3P19447 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ERCC3P19447 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ERCC3P19447 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ERCC3P19447 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
ERCC3P19447 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ERCC3P19447 AC083843.2-201ENST00000568248 6253 ntBASIC6.31□□□□□ -1.4
ERCC3P19447 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
ERCC3P19447 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ERCC3P19447 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ERCC3P19447 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ERCC3P19447 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
ERCC3P19447 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ERCC3P19447 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.3□□□□□ -1.4
ERCC3P19447 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ERCC3P19447 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.3□□□□□ -1.4
ERCC3P19447 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
ERCC3P19447 GNG5P1-201ENST00000255500 204 ntBASIC6.3□□□□□ -1.4
ERCC3P19447 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
ERCC3P19447 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.3□□□□□ -1.4
ERCC3P19447 RNU1-43P-201ENST00000365052 165 ntBASIC6.3□□□□□ -1.4
ERCC3P19447 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC6.3□□□□□ -1.4
ERCC3P19447 AL358176.3-201ENST00000420757 454 ntBASIC6.3□□□□□ -1.4
ERCC3P19447 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.3□□□□□ -1.4
ERCC3P19447 USP9YP36-201ENST00000424581 829 ntBASIC6.3□□□□□ -1.4
ERCC3P19447 AL138785.1-201ENST00000425821 331 ntBASIC6.3□□□□□ -1.4
ERCC3P19447 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.3□□□□□ -1.4
ERCC3P19447 OFD1P4Y-201ENST00000455273 1179 ntBASIC6.3□□□□□ -1.4
ERCC3P19447 RPL35AP28-201ENST00000459730 331 ntBASIC6.3□□□□□ -1.4
ERCC3P19447 RPL7P15-201ENST00000461190 712 ntBASIC6.3□□□□□ -1.4
ERCC3P19447 SNRPCP2-201ENST00000504370 475 ntBASIC6.3□□□□□ -1.4
ERCC3P19447 AC005798.1-201ENST00000513715 387 ntBASIC6.3□□□□□ -1.4
ERCC3P19447 MTCO2P4-201ENST00000517968 247 ntBASIC6.3□□□□□ -1.4
ERCC3P19447 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC6.3□□□□□ -1.4
ERCC3P19447 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
ERCC3P19447 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.3□□□□□ -1.4
ERCC3P19447 AC084757.1-201ENST00000559987 490 ntBASIC6.3□□□□□ -1.4
ERCC3P19447 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.3□□□□□ -1.4
ERCC3P19447 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.3□□□□□ -1.4
ERCC3P19447 OR4G1P-201ENST00000588632 938 ntBASIC6.3□□□□□ -1.4
ERCC3P19447 AC060780.2-201ENST00000589047 198 ntBASIC6.3□□□□□ -1.4
ERCC3P19447 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC6.3□□□□□ -1.4
ERCC3P19447 AL161734.1-201ENST00000609720 557 ntBASIC6.3□□□□□ -1.4
ERCC3P19447 PISRT1-201ENST00000626175 531 ntBASIC6.3□□□□□ -1.4
ERCC3P19447 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.3□□□□□ -1.4
ERCC3P19447 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
ERCC3P19447 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.3□□□□□ -1.4
ERCC3P19447 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC6.3□□□□□ -1.4
ERCC3P19447 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.29□□□□□ -1.4
ERCC3P19447 AC131971.1-201ENST00000332881 1482 ntBASIC6.29□□□□□ -1.4
ERCC3P19447 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC6.29□□□□□ -1.4
ERCC3P19447 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ERCC3P19447 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC6.29□□□□□ -1.4
ERCC3P19447 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ERCC3P19447 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ERCC3P19447 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms