Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ATF1P18846 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ATF1P18846 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
ATF1P18846 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
ATF1P18846 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
ATF1P18846 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ATF1P18846 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.11□□□□□ -1.91
ATF1P18846 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ATF1P18846 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ATF1P18846 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
ATF1P18846 ZNF33CP-201ENST00000432492 2030 ntBASIC3.11□□□□□ -1.91
ATF1P18846 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.11□□□□□ -1.91
ATF1P18846 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.11□□□□□ -1.91
ATF1P18846 AIMP1P1-201ENST00000418670 937 ntBASIC3.11□□□□□ -1.91
ATF1P18846 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.11□□□□□ -1.91
ATF1P18846 AL139247.1-201ENST00000422768 325 ntBASIC3.11□□□□□ -1.91
ATF1P18846 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.11□□□□□ -1.91
ATF1P18846 RPS27AP12-201ENST00000429552 465 ntBASIC3.11□□□□□ -1.91
ATF1P18846 RPL12P26-201ENST00000452430 487 ntBASIC3.11□□□□□ -1.91
ATF1P18846 RPS20P21-201ENST00000466859 343 ntBASIC3.11□□□□□ -1.91
ATF1P18846 RN7SL330P-201ENST00000469709 307 ntBASIC3.11□□□□□ -1.91
ATF1P18846 TRBV8-2-201ENST00000475637 270 ntBASIC3.11□□□□□ -1.91
ATF1P18846 AL161747.1-201ENST00000480068 358 ntBASIC3.11□□□□□ -1.91
ATF1P18846 AP000563.1-201ENST00000490865 758 ntBASIC3.11□□□□□ -1.91
ATF1P18846 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.11□□□□□ -1.91
ATF1P18846 RNU2-27P-201ENST00000516185 142 ntBASIC3.11□□□□□ -1.91
ATF1P18846 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.11□□□□□ -1.91
ATF1P18846 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.11□□□□□ -1.91
ATF1P18846 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.11□□□□□ -1.91
ATF1P18846 DUXAP6-201ENST00000553858 601 ntBASIC3.11□□□□□ -1.91
ATF1P18846 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.11□□□□□ -1.91
ATF1P18846 EIF1AXP2-201ENST00000555940 413 ntBASIC3.11□□□□□ -1.91
ATF1P18846 AC087499.8-201ENST00000578406 226 ntBASIC3.11□□□□□ -1.91
ATF1P18846 AC053481.4-201ENST00000583164 216 ntBASIC3.11□□□□□ -1.91
ATF1P18846 MIR5187-201ENST00000583479 76 ntBASIC3.11□□□□□ -1.91
ATF1P18846 BNIP3P7-201ENST00000605641 516 ntBASIC3.11□□□□□ -1.91
ATF1P18846 RNA5SP108-201ENST00000605921 117 ntBASIC3.11□□□□□ -1.91
ATF1P18846 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.11□□□□□ -1.91
ATF1P18846 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.11□□□□□ -1.91
ATF1P18846 RNA5SP196-201ENST00000625967 102 ntBASIC3.11□□□□□ -1.91
ATF1P18846 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.11□□□□□ -1.91
ATF1P18846 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ATF1P18846 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.11□□□□□ -1.91
ATF1P18846 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ATF1P18846 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ATF1P18846 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.11□□□□□ -1.91
ATF1P18846 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
ATF1P18846 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ATF1P18846 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ATF1P18846 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ATF1P18846 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
ATF1P18846 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ATF1P18846 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
ATF1P18846 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ATF1P18846 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
ATF1P18846 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
ATF1P18846 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.1□□□□□ -1.91
ATF1P18846 SKINT1L-201ENST00000401057 817 ntBASIC3.1□□□□□ -1.91
ATF1P18846 AL590290.1-201ENST00000405336 380 ntBASIC3.1□□□□□ -1.91
ATF1P18846 DHFRP5-201ENST00000406944 564 ntBASIC3.1□□□□□ -1.91
ATF1P18846 RNU2-21P-201ENST00000410368 188 ntBASIC3.1□□□□□ -1.91
ATF1P18846 AC245054.1-201ENST00000420944 258 ntBASIC3.1□□□□□ -1.91
ATF1P18846 C4BPAP2-201ENST00000428434 478 ntBASIC3.1□□□□□ -1.91
ATF1P18846 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.1□□□□□ -1.91
ATF1P18846 AL357552.1-201ENST00000445254 415 ntBASIC3.1□□□□□ -1.91
ATF1P18846 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.1□□□□□ -1.91
ATF1P18846 AC009220.1-201ENST00000451614 275 ntBASIC3.1□□□□□ -1.91
ATF1P18846 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.1□□□□□ -1.91
ATF1P18846 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.1□□□□□ -1.91
ATF1P18846 AL133162.1-201ENST00000463228 453 ntBASIC3.1□□□□□ -1.91
ATF1P18846 AC021205.2-201ENST00000480069 347 ntBASIC3.1□□□□□ -1.91
ATF1P18846 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.1□□□□□ -1.91
ATF1P18846 VN1R105P-201ENST00000486595 910 ntBASIC3.1□□□□□ -1.91
ATF1P18846 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.1□□□□□ -1.91
ATF1P18846 HMGB1P3-201ENST00000502802 616 ntBASIC3.1□□□□□ -1.91
ATF1P18846 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.1□□□□□ -1.91
ATF1P18846 AC093331.1-201ENST00000521474 169 ntBASIC3.1□□□□□ -1.91
ATF1P18846 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ATF1P18846 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ATF1P18846 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.1□□□□□ -1.91
ATF1P18846 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.1□□□□□ -1.91
ATF1P18846 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.1□□□□□ -1.91
ATF1P18846 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.1□□□□□ -1.91
ATF1P18846 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.1□□□□□ -1.91
ATF1P18846 MIR4286-201ENST00000580651 93 ntBASIC3.1□□□□□ -1.91
ATF1P18846 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ATF1P18846 AL392112.1-201ENST00000605115 829 ntBASIC3.1□□□□□ -1.91
ATF1P18846 AC073111.2-201ENST00000605657 1075 ntBASIC3.1□□□□□ -1.91
ATF1P18846 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.1□□□□□ -1.91
ATF1P18846 ZYXP1-201ENST00000617638 118 ntBASIC3.1□□□□□ -1.91
ATF1P18846 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ATF1P18846 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ATF1P18846 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ATF1P18846 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
ATF1P18846 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ATF1P18846 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
ATF1P18846 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
ATF1P18846 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
ATF1P18846 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
ATF1P18846 RAD1P1-201ENST00000231383 813 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms