Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 DHX40P1-201ENST00000588725 1412 ntBASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 PABPC1P7-201ENST00000413177 1513 ntBASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 ZNF849P-201ENST00000594711 1566 ntBASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
KCNIP3Q9Y2W7 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 AC116667.1-201ENST00000604855 2072 ntBASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 AL158163.1-201ENST00000603915 1649 ntBASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 PWAR6-201ENST00000552334 4618 ntBASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 AC024560.2-201ENST00000507981 1497 ntBASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 GABPAP-201ENST00000419271 1356 ntBASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 AC138915.3-201ENST00000562908 1389 ntBASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 AL583835.1-201ENST00000399570 407 ntBASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 RNU4-25P-201ENST00000410569 230 ntBASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 CHIAP3-201ENST00000423668 1133 ntBASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 AL358472.1-201ENST00000431295 329 ntBASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 AC010881.1-201ENST00000433830 235 ntBASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 AL158053.1-201ENST00000441503 453 ntBASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 RPS20P32-201ENST00000456044 356 ntBASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 AC010468.1-201ENST00000461022 817 ntBASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 TMED11P-201ENST00000479478 690 ntBASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 AC004453.1-201ENST00000487895 408 ntBASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 NDUFB5P1-201ENST00000508134 564 ntBASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 RNA5SP49-201ENST00000516450 115 ntBASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 AP001922.4-201ENST00000526967 290 ntBASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 AC090888.3-201ENST00000558917 509 ntBASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 AC133794.1-201ENST00000602731 914 ntBASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 AC098483.2-201ENST00000603158 454 ntBASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 AC007566.2-201ENST00000603642 413 ntBASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 BRDTP1-201ENST00000605735 677 ntBASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 AC016542.1-201ENST00000608259 493 ntBASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 AP004247.3-201ENST00000608682 624 ntBASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 RNVU1-4-201ENST00000612985 164 ntBASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
KCNIP3Q9Y2W7 AC131971.1-201ENST00000332881 1482 ntBASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 Y_RNA.110-201ENST00000363220 99 ntBASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 RNA5SP167-201ENST00000365461 116 ntBASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 RNU6-444P-201ENST00000383988 108 ntBASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 RNU6-932P-201ENST00000391108 106 ntBASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 ATP5F1P4-201ENST00000397288 746 ntBASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 FABP12P1-201ENST00000401911 322 ntBASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 AL590704.1-201ENST00000402856 794 ntBASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 RNU2-72P-201ENST00000411175 163 ntBASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 MTND4P22-201ENST00000413116 1169 ntBASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 RPS3AP9-201ENST00000417027 792 ntBASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 AC005517.2-201ENST00000424673 553 ntBASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 HIGD1AP4-201ENST00000430194 280 ntBASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 AC002542.1-201ENST00000440683 193 ntBASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 CDC42P1-201ENST00000456658 548 ntBASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 AC078918.1-201ENST00000498515 228 ntBASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 PHBP14-201ENST00000512887 367 ntBASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 OR7H2P-201ENST00000513483 306 ntBASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 IGLVIV-65-201ENST00000517313 360 ntBASIC3.3□□□□□ -1.88
KCNIP3Q9Y2W7 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms