Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TREX1Q9NSU2 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TREX1Q9NSU2 RNA5SP479-201ENST00000364858 117 ntBASIC3.55□□□□□ -1.84
TREX1Q9NSU2 SNORA57.1-201ENST00000391227 145 ntBASIC3.55□□□□□ -1.84
TREX1Q9NSU2 CCNB2P1-201ENST00000399411 1150 ntBASIC3.55□□□□□ -1.84
TREX1Q9NSU2 MTND4P11-201ENST00000417020 1058 ntBASIC3.55□□□□□ -1.84
TREX1Q9NSU2 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.55□□□□□ -1.84
TREX1Q9NSU2 AC068533.1-201ENST00000418542 415 ntBASIC3.55□□□□□ -1.84
TREX1Q9NSU2 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.55□□□□□ -1.84
TREX1Q9NSU2 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TREX1Q9NSU2 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.55□□□□□ -1.84
TREX1Q9NSU2 AL031736.2-201ENST00000426573 787 ntBASIC3.55□□□□□ -1.84
TREX1Q9NSU2 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TREX1Q9NSU2 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.55□□□□□ -1.84
TREX1Q9NSU2 AC091959.2-201ENST00000477363 321 ntBASIC3.55□□□□□ -1.84
TREX1Q9NSU2 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.55□□□□□ -1.84
TREX1Q9NSU2 RPL30P11-201ENST00000495304 339 ntBASIC3.55□□□□□ -1.84
TREX1Q9NSU2 OR52A4P-203ENST00000498233 1014 ntBASIC3.55□□□□□ -1.84
TREX1Q9NSU2 AC016550.3-201ENST00000515706 767 ntBASIC3.55□□□□□ -1.84
TREX1Q9NSU2 SNORA70.18-201ENST00000516696 98 ntBASIC3.55□□□□□ -1.84
TREX1Q9NSU2 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.55□□□□□ -1.84
TREX1Q9NSU2 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.55□□□□□ -1.84
TREX1Q9NSU2 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.55□□□□□ -1.84
TREX1Q9NSU2 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.55□□□□□ -1.84
TREX1Q9NSU2 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.55□□□□□ -1.84
TREX1Q9NSU2 DUXAP6-201ENST00000553858 601 ntBASIC3.55□□□□□ -1.84
TREX1Q9NSU2 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
TREX1Q9NSU2 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.55□□□□□ -1.84
TREX1Q9NSU2 AC020914.6-201ENST00000594327 272 ntBASIC3.55□□□□□ -1.84
TREX1Q9NSU2 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.55□□□□□ -1.84
TREX1Q9NSU2 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TREX1Q9NSU2 BNIP3P38-201ENST00000601117 544 ntBASIC3.55□□□□□ -1.84
TREX1Q9NSU2 AP004372.1-201ENST00000604842 844 ntBASIC3.55□□□□□ -1.84
TREX1Q9NSU2 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.55□□□□□ -1.84
TREX1Q9NSU2 AC012557.1-201ENST00000607115 611 ntBASIC3.55□□□□□ -1.84
TREX1Q9NSU2 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.55□□□□□ -1.84
TREX1Q9NSU2 AC055764.2-201ENST00000610089 670 ntBASIC3.55□□□□□ -1.84
TREX1Q9NSU2 AL357559.1-201ENST00000622228 274 ntBASIC3.55□□□□□ -1.84
TREX1Q9NSU2 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.55□□□□□ -1.84
TREX1Q9NSU2 U6.98-201ENST00000637157 84 ntBASIC3.55□□□□□ -1.84
TREX1Q9NSU2 AC119674.1-220ENST00000641502 1048 ntBASIC3.55□□□□□ -1.84
TREX1Q9NSU2 AC058791.1-201ENST00000608412 3198 ntBASIC3.55□□□□□ -1.84
TREX1Q9NSU2 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TREX1Q9NSU2 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.55□□□□□ -1.84
TREX1Q9NSU2 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TREX1Q9NSU2 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.54□□□□□ -1.84
TREX1Q9NSU2 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.54□□□□□ -1.84
TREX1Q9NSU2 MFSD8-233ENST00000641482 4860 ntBASIC3.54□□□□□ -1.84
TREX1Q9NSU2 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.54□□□□□ -1.84
TREX1Q9NSU2 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TREX1Q9NSU2 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
TREX1Q9NSU2 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TREX1Q9NSU2 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TREX1Q9NSU2 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TREX1Q9NSU2 DBIP2-201ENST00000419076 262 ntBASIC3.54□□□□□ -1.84
TREX1Q9NSU2 RPS24P8-201ENST00000431490 402 ntBASIC3.54□□□□□ -1.84
TREX1Q9NSU2 AL606490.7-201ENST00000433136 191 ntBASIC3.54□□□□□ -1.84
TREX1Q9NSU2 CBX1P4-201ENST00000439415 457 ntBASIC3.54□□□□□ -1.84
TREX1Q9NSU2 AC023512.1-201ENST00000444513 499 ntBASIC3.54□□□□□ -1.84
TREX1Q9NSU2 AC023598.1-201ENST00000472521 361 ntBASIC3.54□□□□□ -1.84
TREX1Q9NSU2 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.54□□□□□ -1.84
TREX1Q9NSU2 AL161747.1-201ENST00000480068 358 ntBASIC3.54□□□□□ -1.84
TREX1Q9NSU2 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.54□□□□□ -1.84
TREX1Q9NSU2 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.54□□□□□ -1.84
TREX1Q9NSU2 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.54□□□□□ -1.84
TREX1Q9NSU2 AL391497.1-201ENST00000608671 547 ntBASIC3.54□□□□□ -1.84
TREX1Q9NSU2 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.54□□□□□ -1.84
TREX1Q9NSU2 RNVU1-4-201ENST00000612985 164 ntBASIC3.54□□□□□ -1.84
TREX1Q9NSU2 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TREX1Q9NSU2 AC121761.2-201ENST00000617300 689 ntBASIC3.54□□□□□ -1.84
TREX1Q9NSU2 AC007342.8-201ENST00000623278 678 ntBASIC3.54□□□□□ -1.84
TREX1Q9NSU2 AC015726.3-201ENST00000624501 418 ntBASIC3.54□□□□□ -1.84
TREX1Q9NSU2 AC048347.1-201ENST00000624621 427 ntBASIC3.54□□□□□ -1.84
TREX1Q9NSU2 AC112200.1-201ENST00000625015 234 ntBASIC3.54□□□□□ -1.84
TREX1Q9NSU2 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.54□□□□□ -1.84
TREX1Q9NSU2 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TREX1Q9NSU2 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.54□□□□□ -1.84
TREX1Q9NSU2 AP001148.1-201ENST00000624124 2359 ntBASIC3.54□□□□□ -1.84
TREX1Q9NSU2 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TREX1Q9NSU2 AL353743.4-201ENST00000422653 1547 ntBASIC3.54□□□□□ -1.84
TREX1Q9NSU2 NMD3P1-201ENST00000439704 1488 ntBASIC3.54□□□□□ -1.84
TREX1Q9NSU2 AP001486.2-201ENST00000561652 5113 ntBASIC3.54□□□□□ -1.84
TREX1Q9NSU2 HSPA8P1-201ENST00000425843 1833 ntBASIC3.54□□□□□ -1.84
TREX1Q9NSU2 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TREX1Q9NSU2 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TREX1Q9NSU2 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
TREX1Q9NSU2 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
TREX1Q9NSU2 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
TREX1Q9NSU2 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.53□□□□□ -1.84
TREX1Q9NSU2 Z98941.1-201ENST00000407764 100 ntBASIC3.53□□□□□ -1.84
TREX1Q9NSU2 MIR1193-201ENST00000408109 78 ntBASIC3.53□□□□□ -1.84
TREX1Q9NSU2 RN7SKP159-201ENST00000410657 292 ntBASIC3.53□□□□□ -1.84
TREX1Q9NSU2 AC004022.2-201ENST00000413824 193 ntBASIC3.53□□□□□ -1.84
TREX1Q9NSU2 AL035423.1-201ENST00000420331 213 ntBASIC3.53□□□□□ -1.84
TREX1Q9NSU2 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.53□□□□□ -1.84
TREX1Q9NSU2 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
TREX1Q9NSU2 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.53□□□□□ -1.84
TREX1Q9NSU2 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.53□□□□□ -1.84
TREX1Q9NSU2 AL158071.1-201ENST00000430315 461 ntBASIC3.53□□□□□ -1.84
TREX1Q9NSU2 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms