Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.37□□□□□ -1.71
RAD9AQ99638 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RAD9AQ99638 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RAD9AQ99638 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
RAD9AQ99638 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
RAD9AQ99638 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RAD9AQ99638 AC073055.1-201ENST00000456901 1621 ntBASIC4.36□□□□□ -1.71
RAD9AQ99638 AC090229.1-201ENST00000590983 1609 ntBASIC4.36□□□□□ -1.71
RAD9AQ99638 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RAD9AQ99638 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.36□□□□□ -1.71
RAD9AQ99638 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.36□□□□□ -1.71
RAD9AQ99638 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RAD9AQ99638 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
RAD9AQ99638 RNU5B-1-201ENST00000363286 116 ntBASIC4.36□□□□□ -1.71
RAD9AQ99638 RNU6-1339P-201ENST00000363574 91 ntBASIC4.36□□□□□ -1.71
RAD9AQ99638 OR52E6-202ENST00000379946 954 ntBASIC4.36□□□□□ -1.71
RAD9AQ99638 U8.11-201ENST00000384699 133 ntBASIC4.36□□□□□ -1.71
RAD9AQ99638 U8.12-201ENST00000384701 133 ntBASIC4.36□□□□□ -1.71
RAD9AQ99638 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RAD9AQ99638 SNORD65C-201ENST00000390962 71 ntBASIC4.36□□□□□ -1.71
RAD9AQ99638 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RAD9AQ99638 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.36□□□□□ -1.71
RAD9AQ99638 SNORA3.3-201ENST00000408712 125 ntBASIC4.36□□□□□ -1.71
RAD9AQ99638 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.36□□□□□ -1.71
RAD9AQ99638 DYNLL1P7-201ENST00000429273 258 ntBASIC4.36□□□□□ -1.71
RAD9AQ99638 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.36□□□□□ -1.71
RAD9AQ99638 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.36□□□□□ -1.71
RAD9AQ99638 AL451050.1-201ENST00000450126 415 ntBASIC4.36□□□□□ -1.71
RAD9AQ99638 RPL37P3-201ENST00000456825 293 ntBASIC4.36□□□□□ -1.71
RAD9AQ99638 U8.18-201ENST00000459285 133 ntBASIC4.36□□□□□ -1.71
RAD9AQ99638 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.36□□□□□ -1.71
RAD9AQ99638 PRELID3BP7-201ENST00000503606 469 ntBASIC4.36□□□□□ -1.71
RAD9AQ99638 SNORA74D-201ENST00000516404 141 ntBASIC4.36□□□□□ -1.71
RAD9AQ99638 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.36□□□□□ -1.71
RAD9AQ99638 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.36□□□□□ -1.71
RAD9AQ99638 COX6B1P6-201ENST00000522347 255 ntBASIC4.36□□□□□ -1.71
RAD9AQ99638 AC118942.1-201ENST00000529674 1035 ntBASIC4.36□□□□□ -1.71
RAD9AQ99638 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.36□□□□□ -1.71
RAD9AQ99638 AC090751.1-201ENST00000566966 267 ntBASIC4.36□□□□□ -1.71
RAD9AQ99638 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.36□□□□□ -1.71
RAD9AQ99638 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.36□□□□□ -1.71
RAD9AQ99638 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RAD9AQ99638 AC018754.1-201ENST00000607486 925 ntBASIC4.36□□□□□ -1.71
RAD9AQ99638 AL159169.3-201ENST00000608871 561 ntBASIC4.36□□□□□ -1.71
RAD9AQ99638 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RAD9AQ99638 AC009237.17-201ENST00000618111 748 ntBASIC4.36□□□□□ -1.71
RAD9AQ99638 AC084824.4-201ENST00000620106 731 ntBASIC4.36□□□□□ -1.71
RAD9AQ99638 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RAD9AQ99638 CR392039.4-201ENST00000624968 501 ntBASIC4.36□□□□□ -1.71
RAD9AQ99638 AP003485.1-201ENST00000625093 753 ntBASIC4.36□□□□□ -1.71
RAD9AQ99638 ATE1-AS1-202ENST00000636460 506 ntBASIC4.36□□□□□ -1.71
RAD9AQ99638 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RAD9AQ99638 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RAD9AQ99638 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.36□□□□□ -1.71
RAD9AQ99638 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.36□□□□□ -1.71
RAD9AQ99638 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RAD9AQ99638 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RAD9AQ99638 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RAD9AQ99638 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.36□□□□□ -1.71
RAD9AQ99638 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RAD9AQ99638 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RAD9AQ99638 ERCC6-202ENST00000374127 1782 ntBASIC4.35□□□□□ -1.71
RAD9AQ99638 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RAD9AQ99638 AC073346.2-201ENST00000624724 2058 ntBASIC4.35□□□□□ -1.71
RAD9AQ99638 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RAD9AQ99638 SNORA72.3-201ENST00000365074 132 ntBASIC4.35□□□□□ -1.71
RAD9AQ99638 RNU6-298P-201ENST00000390888 96 ntBASIC4.35□□□□□ -1.71
RAD9AQ99638 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.35□□□□□ -1.71
RAD9AQ99638 AC068533.1-201ENST00000418542 415 ntBASIC4.35□□□□□ -1.71
RAD9AQ99638 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.35□□□□□ -1.71
RAD9AQ99638 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.35□□□□□ -1.71
RAD9AQ99638 RPL30P3-201ENST00000424262 333 ntBASIC4.35□□□□□ -1.71
RAD9AQ99638 AC002542.1-201ENST00000440683 193 ntBASIC4.35□□□□□ -1.71
RAD9AQ99638 RPS7P5-201ENST00000441482 581 ntBASIC4.35□□□□□ -1.71
RAD9AQ99638 RPS11P1-201ENST00000451072 473 ntBASIC4.35□□□□□ -1.71
RAD9AQ99638 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.35□□□□□ -1.71
RAD9AQ99638 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.35□□□□□ -1.71
RAD9AQ99638 AC090013.1-201ENST00000485147 480 ntBASIC4.35□□□□□ -1.71
RAD9AQ99638 RPL29P14-201ENST00000495837 428 ntBASIC4.35□□□□□ -1.71
RAD9AQ99638 AC023050.1-201ENST00000498198 304 ntBASIC4.35□□□□□ -1.71
RAD9AQ99638 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.35□□□□□ -1.71
RAD9AQ99638 AC026414.1-201ENST00000504046 698 ntBASIC4.35□□□□□ -1.71
RAD9AQ99638 HMGB3P13-201ENST00000511263 607 ntBASIC4.35□□□□□ -1.71
RAD9AQ99638 SNORA70.24-201ENST00000517233 118 ntBASIC4.35□□□□□ -1.71
RAD9AQ99638 AC010376.1-201ENST00000522101 334 ntBASIC4.35□□□□□ -1.71
RAD9AQ99638 AC022790.1-201ENST00000522872 204 ntBASIC4.35□□□□□ -1.71
RAD9AQ99638 AC010306.1-201ENST00000523223 1117 ntBASIC4.35□□□□□ -1.71
RAD9AQ99638 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.35□□□□□ -1.71
RAD9AQ99638 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.35□□□□□ -1.71
RAD9AQ99638 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.35□□□□□ -1.71
RAD9AQ99638 MTND6P33-201ENST00000571794 183 ntBASIC4.35□□□□□ -1.71
RAD9AQ99638 AL121834.1-201ENST00000572284 509 ntBASIC4.35□□□□□ -1.71
RAD9AQ99638 NF1P5-201ENST00000588287 448 ntBASIC4.35□□□□□ -1.71
RAD9AQ99638 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.35□□□□□ -1.71
RAD9AQ99638 AC015726.1-201ENST00000602353 681 ntBASIC4.35□□□□□ -1.71
RAD9AQ99638 AL606834.3-201ENST00000602615 496 ntBASIC4.35□□□□□ -1.71
RAD9AQ99638 AC091057.3-201ENST00000602684 733 ntBASIC4.35□□□□□ -1.71
RAD9AQ99638 AC096947.1-201ENST00000603233 470 ntBASIC4.35□□□□□ -1.71
RAD9AQ99638 AC007390.2-201ENST00000606229 3803 ntBASIC4.35□□□□□ -1.71
RAD9AQ99638 AL391497.1-201ENST00000608671 547 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 144.8 ms