Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 SNORD66.1-201ENST00000391230 76 ntBASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 RNU6-272P-201ENST00000411028 104 ntBASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 PRELID3BP11-201ENST00000414230 479 ntBASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 AL161631.1-201ENST00000417933 486 ntBASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 PTGES3P1-201ENST00000439531 483 ntBASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 MTCO1P53-201ENST00000441633 699 ntBASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 RPS4XP4-201ENST00000443195 763 ntBASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 NAP1L1P3-201ENST00000462291 880 ntBASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 PRDX3P4-201ENST00000470828 747 ntBASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 RPS27P23-201ENST00000487608 251 ntBASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 RPS4XP15-201ENST00000489210 795 ntBASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 AC110792.2-201ENST00000510278 224 ntBASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 AC006499.6-201ENST00000511169 607 ntBASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 AC111188.2-201ENST00000529697 1387 ntBASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 AC138393.1-206ENST00000540997 1886 ntBASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 MTND1P24-201ENST00000552175 861 ntBASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 MTND1P8-201ENST00000571424 950 ntBASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 AC233702.9-201ENST00000581528 203 ntBASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 AC067852.4-201ENST00000590314 478 ntBASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 AL160237.3-201ENST00000604114 1013 ntBASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 AC084757.4-201ENST00000616350 526 ntBASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 MIR8069-1-201ENST00000616627 86 ntBASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 MIR8069-2-201ENST00000621412 86 ntBASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 MIR6715B-201ENST00000637172 77 ntBASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 AL672167.1-205ENST00000641112 3080 ntBASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LYSMD4Q5XG99 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 RNU6-525P-201ENST00000363685 104 ntBASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 RNU6-213P-201ENST00000384051 104 ntBASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 RAB9AP3-201ENST00000412737 573 ntBASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 AC006011.1-201ENST00000442758 349 ntBASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 HMGB1P48-201ENST00000446155 598 ntBASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 RAB9AP1-201ENST00000449393 573 ntBASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 OFD1P3Y-201ENST00000453312 783 ntBASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 RPL6P9-201ENST00000466502 859 ntBASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 HMGB1P21-201ENST00000502313 581 ntBASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 AP001542.2-201ENST00000593141 364 ntBASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 AC091488.1-201ENST00000604239 660 ntBASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 AC063944.3-201ENST00000609969 533 ntBASIC4.07□□□□□ -1.76
LYSMD4Q5XG99 VN1R7P-201ENST00000619242 903 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms