Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 AC016907.1-201ENST00000419483 435 ntBASIC5.31□□□□□ -1.56
LONRF3Q496Y0 AC011233.1-201ENST00000422812 283 ntBASIC5.31□□□□□ -1.56
LONRF3Q496Y0 AC096632.1-201ENST00000427395 310 ntBASIC5.31□□□□□ -1.56
LONRF3Q496Y0 AL138878.2-201ENST00000440581 1241 ntBASIC5.31□□□□□ -1.56
LONRF3Q496Y0 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.31□□□□□ -1.56
LONRF3Q496Y0 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC5.31□□□□□ -1.56
LONRF3Q496Y0 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC5.31□□□□□ -1.56
LONRF3Q496Y0 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.31□□□□□ -1.56
LONRF3Q496Y0 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.31□□□□□ -1.56
LONRF3Q496Y0 AC104971.1-201ENST00000495117 578 ntBASIC5.31□□□□□ -1.56
LONRF3Q496Y0 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC5.31□□□□□ -1.56
LONRF3Q496Y0 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.31□□□□□ -1.56
LONRF3Q496Y0 HMGB3P13-201ENST00000511263 607 ntBASIC5.31□□□□□ -1.56
LONRF3Q496Y0 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LONRF3Q496Y0 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.31□□□□□ -1.56
LONRF3Q496Y0 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.31□□□□□ -1.56
LONRF3Q496Y0 OR4C2P-201ENST00000530855 1064 ntBASIC5.31□□□□□ -1.56
LONRF3Q496Y0 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.31□□□□□ -1.56
LONRF3Q496Y0 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.31□□□□□ -1.56
LONRF3Q496Y0 AC093519.1-201ENST00000566109 298 ntBASIC5.31□□□□□ -1.56
LONRF3Q496Y0 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.31□□□□□ -1.56
LONRF3Q496Y0 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.31□□□□□ -1.56
LONRF3Q496Y0 MIR3912-201ENST00000577566 105 ntBASIC5.31□□□□□ -1.56
LONRF3Q496Y0 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.31□□□□□ -1.56
LONRF3Q496Y0 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.31□□□□□ -1.56
LONRF3Q496Y0 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC5.31□□□□□ -1.56
LONRF3Q496Y0 AC234771.5-201ENST00000600161 514 ntBASIC5.31□□□□□ -1.56
LONRF3Q496Y0 FAM27B-201ENST00000610601 213 ntBASIC5.31□□□□□ -1.56
LONRF3Q496Y0 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LONRF3Q496Y0 AC005086.4-201ENST00000623065 213 ntBASIC5.31□□□□□ -1.56
LONRF3Q496Y0 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.31□□□□□ -1.56
LONRF3Q496Y0 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.31□□□□□ -1.56
LONRF3Q496Y0 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LONRF3Q496Y0 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
LONRF3Q496Y0 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.31□□□□□ -1.56
LONRF3Q496Y0 AP005901.5-201ENST00000545779 1796 ntBASIC5.31□□□□□ -1.56
LONRF3Q496Y0 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
LONRF3Q496Y0 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LONRF3Q496Y0 NCLP2-201ENST00000416078 1462 ntBASIC5.31□□□□□ -1.56
LONRF3Q496Y0 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
LONRF3Q496Y0 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LONRF3Q496Y0 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LONRF3Q496Y0 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.3□□□□□ -1.56
LONRF3Q496Y0 ELL2P4-201ENST00000446870 1376 ntBASIC5.3□□□□□ -1.56
LONRF3Q496Y0 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
LONRF3Q496Y0 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
LONRF3Q496Y0 MFSD8-216ENST00000641147 4009 ntBASIC5.3□□□□□ -1.56
LONRF3Q496Y0 AC108751.5-201ENST00000492880 1336 ntBASIC5.3□□□□□ -1.56
LONRF3Q496Y0 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LONRF3Q496Y0 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LONRF3Q496Y0 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LONRF3Q496Y0 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.3□□□□□ -1.56
LONRF3Q496Y0 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LONRF3Q496Y0 AC126755.2-208ENST00000327792 462 ntBASIC5.3□□□□□ -1.56
LONRF3Q496Y0 AC138969.1-213ENST00000331436 462 ntBASIC5.3□□□□□ -1.56
LONRF3Q496Y0 RNU1-32P-201ENST00000363937 159 ntBASIC5.3□□□□□ -1.56
LONRF3Q496Y0 Y_RNA.192-201ENST00000363977 102 ntBASIC5.3□□□□□ -1.56
LONRF3Q496Y0 Y_RNA.318-201ENST00000365131 97 ntBASIC5.3□□□□□ -1.56
LONRF3Q496Y0 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LONRF3Q496Y0 RNU6-157P-201ENST00000383957 107 ntBASIC5.3□□□□□ -1.56
LONRF3Q496Y0 RNA5SP332-201ENST00000391063 115 ntBASIC5.3□□□□□ -1.56
LONRF3Q496Y0 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.3□□□□□ -1.56
LONRF3Q496Y0 RSL24D1P4-201ENST00000400938 484 ntBASIC5.3□□□□□ -1.56
LONRF3Q496Y0 SSXP10-201ENST00000402595 565 ntBASIC5.3□□□□□ -1.56
LONRF3Q496Y0 AL121978.1-201ENST00000402778 359 ntBASIC5.3□□□□□ -1.56
LONRF3Q496Y0 AL603766.1-201ENST00000407763 664 ntBASIC5.3□□□□□ -1.56
LONRF3Q496Y0 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.3□□□□□ -1.56
LONRF3Q496Y0 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.3□□□□□ -1.56
LONRF3Q496Y0 AC006960.1-201ENST00000419980 153 ntBASIC5.3□□□□□ -1.56
LONRF3Q496Y0 COX6CP15-201ENST00000426313 211 ntBASIC5.3□□□□□ -1.56
LONRF3Q496Y0 AL390023.1-201ENST00000428836 262 ntBASIC5.3□□□□□ -1.56
LONRF3Q496Y0 CNOT7P1-201ENST00000429006 852 ntBASIC5.3□□□□□ -1.56
LONRF3Q496Y0 AC005345.1-201ENST00000431868 217 ntBASIC5.3□□□□□ -1.56
LONRF3Q496Y0 NRBF2P3-201ENST00000432731 865 ntBASIC5.3□□□□□ -1.56
LONRF3Q496Y0 AC005154.2-201ENST00000438110 379 ntBASIC5.3□□□□□ -1.56
LONRF3Q496Y0 AL445567.1-201ENST00000439121 144 ntBASIC5.3□□□□□ -1.56
LONRF3Q496Y0 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.3□□□□□ -1.56
LONRF3Q496Y0 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
LONRF3Q496Y0 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.3□□□□□ -1.56
LONRF3Q496Y0 AC079168.2-201ENST00000453977 416 ntBASIC5.3□□□□□ -1.56
LONRF3Q496Y0 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
LONRF3Q496Y0 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
LONRF3Q496Y0 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.3□□□□□ -1.56
LONRF3Q496Y0 RPF2P2-201ENST00000504693 896 ntBASIC5.3□□□□□ -1.56
LONRF3Q496Y0 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
LONRF3Q496Y0 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.3□□□□□ -1.56
LONRF3Q496Y0 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.3□□□□□ -1.56
LONRF3Q496Y0 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.3□□□□□ -1.56
LONRF3Q496Y0 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.3□□□□□ -1.56
LONRF3Q496Y0 AP001317.1-201ENST00000531194 960 ntBASIC5.3□□□□□ -1.56
LONRF3Q496Y0 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.3□□□□□ -1.56
LONRF3Q496Y0 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.3□□□□□ -1.56
LONRF3Q496Y0 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.3□□□□□ -1.56
LONRF3Q496Y0 AC090888.1-201ENST00000561335 1141 ntBASIC5.3□□□□□ -1.56
LONRF3Q496Y0 MTCYBP33-201ENST00000575007 1130 ntBASIC5.3□□□□□ -1.56
LONRF3Q496Y0 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.3□□□□□ -1.56
LONRF3Q496Y0 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.3□□□□□ -1.56
LONRF3Q496Y0 AL009028.1-201ENST00000604895 802 ntBASIC5.3□□□□□ -1.56
LONRF3Q496Y0 SNORD91B-202ENST00000608459 222 ntBASIC5.3□□□□□ -1.56
LONRF3Q496Y0 MIR6780A-201ENST00000615089 68 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 152 ms