Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.84□□□□□ -1.79
TPM4P67936 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.84□□□□□ -1.79
TPM4P67936 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.84□□□□□ -1.79
TPM4P67936 AC108064.1-201ENST00000513791 460 ntBASIC3.84□□□□□ -1.79
TPM4P67936 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.84□□□□□ -1.79
TPM4P67936 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TPM4P67936 PTP4A1P6-201ENST00000531034 478 ntBASIC3.84□□□□□ -1.79
TPM4P67936 MTND5P21-201ENST00000531961 522 ntBASIC3.84□□□□□ -1.79
TPM4P67936 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.84□□□□□ -1.79
TPM4P67936 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.84□□□□□ -1.79
TPM4P67936 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC3.84□□□□□ -1.79
TPM4P67936 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.84□□□□□ -1.79
TPM4P67936 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.84□□□□□ -1.79
TPM4P67936 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.84□□□□□ -1.79
TPM4P67936 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.84□□□□□ -1.79
TPM4P67936 AC055764.2-201ENST00000610089 670 ntBASIC3.84□□□□□ -1.79
TPM4P67936 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.84□□□□□ -1.79
TPM4P67936 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.84□□□□□ -1.79
TPM4P67936 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.84□□□□□ -1.79
TPM4P67936 AL592494.2-201ENST00000425455 1548 ntBASIC3.84□□□□□ -1.8
TPM4P67936 SRP72P2-201ENST00000344851 1979 ntBASIC3.83□□□□□ -1.8
TPM4P67936 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TPM4P67936 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TPM4P67936 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TPM4P67936 RNU6-628P-201ENST00000410675 107 ntBASIC3.83□□□□□ -1.8
TPM4P67936 RNA5SP498-201ENST00000411342 120 ntBASIC3.83□□□□□ -1.8
TPM4P67936 HMGB3P23-201ENST00000414981 585 ntBASIC3.83□□□□□ -1.8
TPM4P67936 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.83□□□□□ -1.8
TPM4P67936 YY1P1-201ENST00000427625 668 ntBASIC3.83□□□□□ -1.8
TPM4P67936 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.83□□□□□ -1.8
TPM4P67936 MTCYBP31-201ENST00000438855 1122 ntBASIC3.83□□□□□ -1.8
TPM4P67936 CBX1P4-201ENST00000439415 457 ntBASIC3.83□□□□□ -1.8
TPM4P67936 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.83□□□□□ -1.8
TPM4P67936 TPT1P13-201ENST00000449760 499 ntBASIC3.83□□□□□ -1.8
TPM4P67936 PPIAP3-201ENST00000450588 505 ntBASIC3.83□□□□□ -1.8
TPM4P67936 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.83□□□□□ -1.8
TPM4P67936 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
TPM4P67936 AC078785.3-201ENST00000476607 425 ntBASIC3.83□□□□□ -1.8
TPM4P67936 RN7SL132P-201ENST00000478131 296 ntBASIC3.83□□□□□ -1.8
TPM4P67936 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.83□□□□□ -1.8
TPM4P67936 AL133372.1-201ENST00000493565 745 ntBASIC3.83□□□□□ -1.8
TPM4P67936 AC104027.1-201ENST00000521887 300 ntBASIC3.83□□□□□ -1.8
TPM4P67936 HIGD1AP10-201ENST00000527837 282 ntBASIC3.83□□□□□ -1.8
TPM4P67936 AP004242.1-201ENST00000533701 349 ntBASIC3.83□□□□□ -1.8
TPM4P67936 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.83□□□□□ -1.8
TPM4P67936 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.83□□□□□ -1.8
TPM4P67936 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.83□□□□□ -1.8
TPM4P67936 ZNF192P1-203ENST00000565888 810 ntBASIC3.83□□□□□ -1.8
TPM4P67936 AC006557.5-201ENST00000603126 811 ntBASIC3.83□□□□□ -1.8
TPM4P67936 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.83□□□□□ -1.8
TPM4P67936 MIR6820-201ENST00000611508 62 ntBASIC3.83□□□□□ -1.8
TPM4P67936 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC3.83□□□□□ -1.8
TPM4P67936 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.83□□□□□ -1.8
TPM4P67936 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.83□□□□□ -1.8
TPM4P67936 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.83□□□□□ -1.8
TPM4P67936 AC119744.1-201ENST00000454746 1715 ntBASIC3.83□□□□□ -1.8
TPM4P67936 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.83□□□□□ -1.8
TPM4P67936 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
TPM4P67936 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TPM4P67936 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
TPM4P67936 AC004972.1-201ENST00000623934 2209 ntBASIC3.82□□□□□ -1.8
TPM4P67936 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TPM4P67936 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
TPM4P67936 MIR148B-201ENST00000362252 99 ntBASIC3.82□□□□□ -1.8
TPM4P67936 SNORD56.3-201ENST00000363507 71 ntBASIC3.82□□□□□ -1.8
TPM4P67936 U3.11-201ENST00000364476 212 ntBASIC3.82□□□□□ -1.8
TPM4P67936 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
TPM4P67936 RNU1-13P-201ENST00000384499 162 ntBASIC3.82□□□□□ -1.8
TPM4P67936 HSPE1P26-201ENST00000405341 275 ntBASIC3.82□□□□□ -1.8
TPM4P67936 RN7SKP156-201ENST00000410308 342 ntBASIC3.82□□□□□ -1.8
TPM4P67936 AC004987.3-201ENST00000413879 771 ntBASIC3.82□□□□□ -1.8
TPM4P67936 AL031736.2-201ENST00000426573 787 ntBASIC3.82□□□□□ -1.8
TPM4P67936 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.82□□□□□ -1.8
TPM4P67936 RPL31P20-201ENST00000449593 360 ntBASIC3.82□□□□□ -1.8
TPM4P67936 TPMTP4-201ENST00000450749 678 ntBASIC3.82□□□□□ -1.8
TPM4P67936 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.82□□□□□ -1.8
TPM4P67936 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
TPM4P67936 HMGN1P11-201ENST00000508668 303 ntBASIC3.82□□□□□ -1.8
TPM4P67936 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.82□□□□□ -1.8
TPM4P67936 AC093853.1-201ENST00000515689 483 ntBASIC3.82□□□□□ -1.8
TPM4P67936 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.82□□□□□ -1.8
TPM4P67936 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.82□□□□□ -1.8
TPM4P67936 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.82□□□□□ -1.8
TPM4P67936 U4.6-201ENST00000621618 127 ntBASIC3.82□□□□□ -1.8
TPM4P67936 AC073476.4-201ENST00000628409 72 ntBASIC3.82□□□□□ -1.8
TPM4P67936 MIR6830-201ENST00000636015 70 ntBASIC3.82□□□□□ -1.8
TPM4P67936 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.82□□□□□ -1.8
TPM4P67936 AP001148.1-201ENST00000624124 2359 ntBASIC3.81□□□□□ -1.8
TPM4P67936 AC093010.3-201ENST00000570269 15214 ntBASIC3.81□□□□□ -1.8
TPM4P67936 MIR372-201ENST00000362225 67 ntBASIC3.81□□□□□ -1.8
TPM4P67936 HMGB1P10-201ENST00000395823 563 ntBASIC3.81□□□□□ -1.8
TPM4P67936 RSL24D1P1-201ENST00000404972 493 ntBASIC3.81□□□□□ -1.8
TPM4P67936 Z99755.1-201ENST00000414048 380 ntBASIC3.81□□□□□ -1.8
TPM4P67936 ELOCP11-201ENST00000436690 332 ntBASIC3.81□□□□□ -1.8
TPM4P67936 HMGB3P11-201ENST00000440127 604 ntBASIC3.81□□□□□ -1.8
TPM4P67936 RPS7P5-201ENST00000441482 581 ntBASIC3.81□□□□□ -1.8
TPM4P67936 ELOCP16-201ENST00000444494 332 ntBASIC3.81□□□□□ -1.8
TPM4P67936 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.81□□□□□ -1.8
TPM4P67936 AC108078.3-201ENST00000502633 489 ntBASIC3.81□□□□□ -1.8
TPM4P67936 AC023141.12-201ENST00000512399 199 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms