Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.28□□□□□ -1.72
SOX2P48431 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.28□□□□□ -1.72
SOX2P48431 RPL17P12-201ENST00000413391 526 ntBASIC4.28□□□□□ -1.72
SOX2P48431 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.28□□□□□ -1.72
SOX2P48431 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SOX2P48431 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.28□□□□□ -1.72
SOX2P48431 AC004938.1-201ENST00000438468 308 ntBASIC4.28□□□□□ -1.72
SOX2P48431 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.28□□□□□ -1.72
SOX2P48431 HMGB3P9-201ENST00000441799 583 ntBASIC4.28□□□□□ -1.72
SOX2P48431 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.28□□□□□ -1.72
SOX2P48431 MTCYBP1-201ENST00000454315 1119 ntBASIC4.28□□□□□ -1.72
SOX2P48431 MEMO1P3-201ENST00000459811 302 ntBASIC4.28□□□□□ -1.72
SOX2P48431 RN7SL517P-201ENST00000462240 305 ntBASIC4.28□□□□□ -1.72
SOX2P48431 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.28□□□□□ -1.72
SOX2P48431 RPL7P16-201ENST00000479738 738 ntBASIC4.28□□□□□ -1.72
SOX2P48431 RPS4XP1-201ENST00000482189 787 ntBASIC4.28□□□□□ -1.72
SOX2P48431 RPS21P4-201ENST00000487122 248 ntBASIC4.28□□□□□ -1.72
SOX2P48431 RPL30P11-201ENST00000495304 339 ntBASIC4.28□□□□□ -1.72
SOX2P48431 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.28□□□□□ -1.72
SOX2P48431 ARL2BPP4-201ENST00000506854 471 ntBASIC4.28□□□□□ -1.72
SOX2P48431 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SOX2P48431 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.28□□□□□ -1.72
SOX2P48431 OR4A45P-201ENST00000529954 901 ntBASIC4.28□□□□□ -1.72
SOX2P48431 CYCSP28-201ENST00000534284 321 ntBASIC4.28□□□□□ -1.72
SOX2P48431 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.28□□□□□ -1.72
SOX2P48431 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.28□□□□□ -1.72
SOX2P48431 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SOX2P48431 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.28□□□□□ -1.72
SOX2P48431 AC027807.1-201ENST00000559921 996 ntBASIC4.28□□□□□ -1.72
SOX2P48431 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.28□□□□□ -1.72
SOX2P48431 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.28□□□□□ -1.72
SOX2P48431 AC110743.1-201ENST00000584870 478 ntBASIC4.28□□□□□ -1.72
SOX2P48431 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.28□□□□□ -1.72
SOX2P48431 AC105254.2-201ENST00000603636 436 ntBASIC4.28□□□□□ -1.72
SOX2P48431 AL589674.2-201ENST00000604304 337 ntBASIC4.28□□□□□ -1.72
SOX2P48431 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.28□□□□□ -1.72
SOX2P48431 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.28□□□□□ -1.72
SOX2P48431 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SOX2P48431 AC126175.1-201ENST00000617041 758 ntBASIC4.28□□□□□ -1.72
SOX2P48431 AC073968.1-201ENST00000618594 637 ntBASIC4.28□□□□□ -1.72
SOX2P48431 AC009704.2-201ENST00000618739 483 ntBASIC4.28□□□□□ -1.72
SOX2P48431 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.28□□□□□ -1.72
SOX2P48431 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.28□□□□□ -1.72
SOX2P48431 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.28□□□□□ -1.72
SOX2P48431 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.28□□□□□ -1.72
SOX2P48431 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.28□□□□□ -1.72
SOX2P48431 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.28□□□□□ -1.72
SOX2P48431 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.28□□□□□ -1.72
SOX2P48431 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
SOX2P48431 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SOX2P48431 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SOX2P48431 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SOX2P48431 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SOX2P48431 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.28□□□□□ -1.72
SOX2P48431 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SOX2P48431 AL445437.1-201ENST00000623157 3087 ntBASIC4.27□□□□□ -1.73
SOX2P48431 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.27□□□□□ -1.73
SOX2P48431 MAPK10-303ENST00000641324 3959 ntBASIC4.27□□□□□ -1.73
SOX2P48431 AL590763.1-201ENST00000398297 1545 ntBASIC4.27□□□□□ -1.73
SOX2P48431 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SOX2P48431 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SOX2P48431 AC117529.2-201ENST00000512159 2068 ntBASIC4.27□□□□□ -1.73
SOX2P48431 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SOX2P48431 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SOX2P48431 AC103591.2-201ENST00000265259 766 ntBASIC4.27□□□□□ -1.73
SOX2P48431 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SOX2P48431 RNU1-83P-201ENST00000363426 164 ntBASIC4.27□□□□□ -1.73
SOX2P48431 SNORA75-201ENST00000384158 137 ntBASIC4.27□□□□□ -1.73
SOX2P48431 AL031985.1-201ENST00000392713 418 ntBASIC4.27□□□□□ -1.73
SOX2P48431 AC025750.1-201ENST00000399891 379 ntBASIC4.27□□□□□ -1.73
SOX2P48431 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.27□□□□□ -1.73
SOX2P48431 AL133384.1-201ENST00000412744 351 ntBASIC4.27□□□□□ -1.73
SOX2P48431 RPL21P108-201ENST00000413857 481 ntBASIC4.27□□□□□ -1.73
SOX2P48431 AL139128.1-201ENST00000413921 941 ntBASIC4.27□□□□□ -1.73
SOX2P48431 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.27□□□□□ -1.73
SOX2P48431 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.27□□□□□ -1.73
SOX2P48431 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.27□□□□□ -1.73
SOX2P48431 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.27□□□□□ -1.73
SOX2P48431 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.27□□□□□ -1.73
SOX2P48431 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SOX2P48431 RPL36P19-201ENST00000430744 301 ntBASIC4.27□□□□□ -1.73
SOX2P48431 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.27□□□□□ -1.73
SOX2P48431 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.27□□□□□ -1.73
SOX2P48431 RPL23AP16-201ENST00000441715 421 ntBASIC4.27□□□□□ -1.73
SOX2P48431 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.27□□□□□ -1.73
SOX2P48431 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.27□□□□□ -1.73
SOX2P48431 SRRM1P2-201ENST00000464531 1192 ntBASIC4.27□□□□□ -1.73
SOX2P48431 AP000893.1-201ENST00000474462 794 ntBASIC4.27□□□□□ -1.73
SOX2P48431 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.27□□□□□ -1.73
SOX2P48431 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.27□□□□□ -1.73
SOX2P48431 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.27□□□□□ -1.73
SOX2P48431 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SOX2P48431 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SOX2P48431 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.27□□□□□ -1.73
SOX2P48431 RNU6-405P-201ENST00000516637 110 ntBASIC4.27□□□□□ -1.73
SOX2P48431 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.27□□□□□ -1.73
SOX2P48431 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SOX2P48431 AC008127.2-201ENST00000549925 1075 ntBASIC4.27□□□□□ -1.73
SOX2P48431 LSM6P2-201ENST00000552208 177 ntBASIC4.27□□□□□ -1.73
SOX2P48431 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms