Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.83□□□□□ -1.64
TM4SF1P30408 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
TM4SF1P30408 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TM4SF1P30408 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TM4SF1P30408 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
TM4SF1P30408 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TM4SF1P30408 BTBD10P1-201ENST00000549824 1352 ntBASIC4.82□□□□□ -1.64
TM4SF1P30408 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
TM4SF1P30408 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.82□□□□□ -1.64
TM4SF1P30408 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
TM4SF1P30408 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TM4SF1P30408 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TM4SF1P30408 ATP5A1P2-201ENST00000412323 255 ntBASIC4.82□□□□□ -1.64
TM4SF1P30408 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.82□□□□□ -1.64
TM4SF1P30408 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.82□□□□□ -1.64
TM4SF1P30408 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.82□□□□□ -1.64
TM4SF1P30408 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.82□□□□□ -1.64
TM4SF1P30408 AL050341.1-201ENST00000447743 313 ntBASIC4.82□□□□□ -1.64
TM4SF1P30408 CDC42P1-201ENST00000456658 548 ntBASIC4.82□□□□□ -1.64
TM4SF1P30408 BX510359.1-201ENST00000456973 237 ntBASIC4.82□□□□□ -1.64
TM4SF1P30408 TPT1P1-201ENST00000458495 518 ntBASIC4.82□□□□□ -1.64
TM4SF1P30408 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TM4SF1P30408 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TM4SF1P30408 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TM4SF1P30408 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TM4SF1P30408 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.82□□□□□ -1.64
TM4SF1P30408 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.82□□□□□ -1.64
TM4SF1P30408 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TM4SF1P30408 AC006272.2-201ENST00000594725 163 ntBASIC4.82□□□□□ -1.64
TM4SF1P30408 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.82□□□□□ -1.64
TM4SF1P30408 Z82195.1-201ENST00000604558 398 ntBASIC4.82□□□□□ -1.64
TM4SF1P30408 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.82□□□□□ -1.64
TM4SF1P30408 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.82□□□□□ -1.64
TM4SF1P30408 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.82□□□□□ -1.64
TM4SF1P30408 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.82□□□□□ -1.64
TM4SF1P30408 AC243312.2-201ENST00000623340 601 ntBASIC4.82□□□□□ -1.64
TM4SF1P30408 AP003072.4-201ENST00000624580 310 ntBASIC4.82□□□□□ -1.64
TM4SF1P30408 AL445984.1-201ENST00000637834 659 ntBASIC4.82□□□□□ -1.64
TM4SF1P30408 AC139713.2-210ENST00000641741 992 ntBASIC4.82□□□□□ -1.64
TM4SF1P30408 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
TM4SF1P30408 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
TM4SF1P30408 ZNF962P-201ENST00000443465 3140 ntBASIC4.82□□□□□ -1.64
TM4SF1P30408 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.82□□□□□ -1.64
TM4SF1P30408 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TM4SF1P30408 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
TM4SF1P30408 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.81□□□□□ -1.64
TM4SF1P30408 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.81□□□□□ -1.64
TM4SF1P30408 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.81□□□□□ -1.64
TM4SF1P30408 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TM4SF1P30408 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TM4SF1P30408 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TM4SF1P30408 BMS1P3-201ENST00000372011 932 ntBASIC4.81□□□□□ -1.64
TM4SF1P30408 MIR634-201ENST00000385208 97 ntBASIC4.81□□□□□ -1.64
TM4SF1P30408 TMSB4XP8-201ENST00000402089 135 ntBASIC4.81□□□□□ -1.64
TM4SF1P30408 RNU6-77P-201ENST00000410554 91 ntBASIC4.81□□□□□ -1.64
TM4SF1P30408 RPL7AP73-201ENST00000413490 353 ntBASIC4.81□□□□□ -1.64
TM4SF1P30408 TMSB4XP6-201ENST00000415187 135 ntBASIC4.81□□□□□ -1.64
TM4SF1P30408 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.81□□□□□ -1.64
TM4SF1P30408 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.81□□□□□ -1.64
TM4SF1P30408 AL158156.1-201ENST00000422509 473 ntBASIC4.81□□□□□ -1.64
TM4SF1P30408 TMSB4XP1-201ENST00000424567 135 ntBASIC4.81□□□□□ -1.64
TM4SF1P30408 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.81□□□□□ -1.64
TM4SF1P30408 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.81□□□□□ -1.64
TM4SF1P30408 ELOCP11-201ENST00000436690 332 ntBASIC4.81□□□□□ -1.64
TM4SF1P30408 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.81□□□□□ -1.64
TM4SF1P30408 ELOCP16-201ENST00000444494 332 ntBASIC4.81□□□□□ -1.64
TM4SF1P30408 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.81□□□□□ -1.64
TM4SF1P30408 AC005002.1-201ENST00000447458 540 ntBASIC4.81□□□□□ -1.64
TM4SF1P30408 AC010374.2-201ENST00000512933 535 ntBASIC4.81□□□□□ -1.64
TM4SF1P30408 RN7SKP13-201ENST00000515933 244 ntBASIC4.81□□□□□ -1.64
TM4SF1P30408 AC022695.1-201ENST00000522089 237 ntBASIC4.81□□□□□ -1.64
TM4SF1P30408 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.81□□□□□ -1.64
TM4SF1P30408 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TM4SF1P30408 AC139103.1-201ENST00000534696 1030 ntBASIC4.81□□□□□ -1.64
TM4SF1P30408 AC006518.2-201ENST00000542513 940 ntBASIC4.81□□□□□ -1.64
TM4SF1P30408 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.81□□□□□ -1.64
TM4SF1P30408 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.81□□□□□ -1.64
TM4SF1P30408 MIR4512-201ENST00000583257 77 ntBASIC4.81□□□□□ -1.64
TM4SF1P30408 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.81□□□□□ -1.64
TM4SF1P30408 AC020914.6-201ENST00000594327 272 ntBASIC4.81□□□□□ -1.64
TM4SF1P30408 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.81□□□□□ -1.64
TM4SF1P30408 AC093673.2-201ENST00000609674 331 ntBASIC4.81□□□□□ -1.64
TM4SF1P30408 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.81□□□□□ -1.64
TM4SF1P30408 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.81□□□□□ -1.64
TM4SF1P30408 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.81□□□□□ -1.64
TM4SF1P30408 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.81□□□□□ -1.64
TM4SF1P30408 AL356118.1-201ENST00000635272 1078 ntBASIC4.81□□□□□ -1.64
TM4SF1P30408 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.81□□□□□ -1.64
TM4SF1P30408 AC119674.1-207ENST00000641355 633 ntBASIC4.81□□□□□ -1.64
TM4SF1P30408 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
TM4SF1P30408 AC126323.6-202ENST00000568092 3511 ntBASIC4.81□□□□□ -1.64
TM4SF1P30408 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.81□□□□□ -1.64
TM4SF1P30408 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TM4SF1P30408 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TM4SF1P30408 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TM4SF1P30408 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
TM4SF1P30408 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TM4SF1P30408 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TM4SF1P30408 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
TM4SF1P30408 SOD2P1-201ENST00000396543 562 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms