Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 uc_338.32-201ENST00000615087 172 ntBASIC2.95□□□□□ -1.94
CD28P10747 U6.48-201ENST00000618523 106 ntBASIC2.95□□□□□ -1.94
CD28P10747 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.95□□□□□ -1.94
CD28P10747 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC2.95□□□□□ -1.94
CD28P10747 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CD28P10747 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC2.95□□□□□ -1.94
CD28P10747 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CD28P10747 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CD28P10747 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CD28P10747 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CD28P10747 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CD28P10747 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC2.94□□□□□ -1.94
CD28P10747 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.94□□□□□ -1.94
CD28P10747 AC090229.1-201ENST00000590983 1609 ntBASIC2.94□□□□□ -1.94
CD28P10747 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC2.94□□□□□ -1.94
CD28P10747 AC025125.1-201ENST00000624743 1922 ntBASIC2.94□□□□□ -1.94
CD28P10747 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
CD28P10747 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CD28P10747 RPL7P60-201ENST00000397636 735 ntBASIC2.94□□□□□ -1.94
CD28P10747 RNU2-65P-201ENST00000410162 185 ntBASIC2.94□□□□□ -1.94
CD28P10747 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC2.94□□□□□ -1.94
CD28P10747 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2.94□□□□□ -1.94
CD28P10747 TCEA1P2-201ENST00000420496 906 ntBASIC2.94□□□□□ -1.94
CD28P10747 ARL2BPP3-201ENST00000421226 480 ntBASIC2.94□□□□□ -1.94
CD28P10747 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC2.94□□□□□ -1.94
CD28P10747 AC096638.2-201ENST00000434965 711 ntBASIC2.94□□□□□ -1.94
CD28P10747 RPL7P29-201ENST00000437151 728 ntBASIC2.94□□□□□ -1.94
CD28P10747 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC2.94□□□□□ -1.94
CD28P10747 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.94□□□□□ -1.94
CD28P10747 RPS17P13-201ENST00000448974 407 ntBASIC2.94□□□□□ -1.94
CD28P10747 HMGB3P22-202ENST00000451823 572 ntBASIC2.94□□□□□ -1.94
CD28P10747 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC2.94□□□□□ -1.94
CD28P10747 RPL37P3-201ENST00000456825 293 ntBASIC2.94□□□□□ -1.94
CD28P10747 UBDP1-202ENST00000457888 382 ntBASIC2.94□□□□□ -1.94
CD28P10747 AC106707.2-201ENST00000484182 374 ntBASIC2.94□□□□□ -1.94
CD28P10747 AC106872.2-201ENST00000494303 480 ntBASIC2.94□□□□□ -1.94
CD28P10747 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.94□□□□□ -1.94
CD28P10747 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.94□□□□□ -1.94
CD28P10747 AC110768.1-201ENST00000509222 400 ntBASIC2.94□□□□□ -1.94
CD28P10747 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.94□□□□□ -1.94
CD28P10747 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC2.94□□□□□ -1.94
CD28P10747 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.94□□□□□ -1.94
CD28P10747 AC022790.1-201ENST00000522872 204 ntBASIC2.94□□□□□ -1.94
CD28P10747 AC004923.2-201ENST00000529649 369 ntBASIC2.94□□□□□ -1.94
CD28P10747 RFPL1S-203ENST00000539579 330 ntBASIC2.94□□□□□ -1.94
CD28P10747 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC2.94□□□□□ -1.94
CD28P10747 AC107016.1-201ENST00000550463 337 ntBASIC2.94□□□□□ -1.94
CD28P10747 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.94□□□□□ -1.94
CD28P10747 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.94□□□□□ -1.94
CD28P10747 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CD28P10747 POLR2KP1-201ENST00000553226 168 ntBASIC2.94□□□□□ -1.94
CD28P10747 CKS1BP1-201ENST00000555221 240 ntBASIC2.94□□□□□ -1.94
CD28P10747 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.94□□□□□ -1.94
CD28P10747 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC2.94□□□□□ -1.94
CD28P10747 AC233266.2-201ENST00000567067 528 ntBASIC2.94□□□□□ -1.94
CD28P10747 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.94□□□□□ -1.94
CD28P10747 MIR3922-201ENST00000585192 84 ntBASIC2.94□□□□□ -1.94
CD28P10747 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.94□□□□□ -1.94
CD28P10747 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC2.94□□□□□ -1.94
CD28P10747 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC2.94□□□□□ -1.94
CD28P10747 AC110741.2-201ENST00000605278 268 ntBASIC2.94□□□□□ -1.94
CD28P10747 AP003392.5-201ENST00000607857 415 ntBASIC2.94□□□□□ -1.94
CD28P10747 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CD28P10747 AC243756.2-201ENST00000618406 463 ntBASIC2.94□□□□□ -1.94
CD28P10747 AL357559.1-201ENST00000622228 274 ntBASIC2.94□□□□□ -1.94
CD28P10747 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.94□□□□□ -1.94
CD28P10747 SAGE4P-201ENST00000442271 3381 ntBASIC2.94□□□□□ -1.94
CD28P10747 LINC00561-201ENST00000565815 2738 ntBASIC2.94□□□□□ -1.94
CD28P10747 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CD28P10747 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CD28P10747 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CD28P10747 BDP1P-201ENST00000582658 1990 ntBASIC2.94□□□□□ -1.94
CD28P10747 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CD28P10747 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CD28P10747 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CD28P10747 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.94□□□□□ -1.94
CD28P10747 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC2.94□□□□□ -1.94
CD28P10747 MTCO1P12-201ENST00000414273 1543 ntBASIC2.93□□□□□ -1.94
CD28P10747 HSPA8P19-201ENST00000505359 1517 ntBASIC2.93□□□□□ -1.94
CD28P10747 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CD28P10747 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CD28P10747 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC2.93□□□□□ -1.94
CD28P10747 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC2.93□□□□□ -1.94
CD28P10747 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CD28P10747 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC2.93□□□□□ -1.94
CD28P10747 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CD28P10747 MTND4P21-201ENST00000453886 1357 ntBASIC2.93□□□□□ -1.94
CD28P10747 XIAPP3-201ENST00000312918 795 ntBASIC2.93□□□□□ -1.94
CD28P10747 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CD28P10747 RNA5SP51-201ENST00000364750 119 ntBASIC2.93□□□□□ -1.94
CD28P10747 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CD28P10747 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CD28P10747 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CD28P10747 RNU1-89P-201ENST00000384592 164 ntBASIC2.93□□□□□ -1.94
CD28P10747 HMGB1P13-201ENST00000406019 642 ntBASIC2.93□□□□□ -1.94
CD28P10747 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC2.93□□□□□ -1.94
CD28P10747 AMD1P2-201ENST00000412936 992 ntBASIC2.93□□□□□ -1.94
CD28P10747 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CD28P10747 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC2.93□□□□□ -1.94
CD28P10747 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms