Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.27□□□□□ -1.73
LDLRP01130 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LDLRP01130 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.27□□□□□ -1.73
LDLRP01130 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LDLRP01130 AC135352.1-201ENST00000506173 1418 ntBASIC4.27□□□□□ -1.73
LDLRP01130 AC099786.3-201ENST00000565735 1410 ntBASIC4.27□□□□□ -1.73
LDLRP01130 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
LDLRP01130 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
LDLRP01130 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
LDLRP01130 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LDLRP01130 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
LDLRP01130 MTND4P26-201ENST00000415971 1359 ntBASIC4.27□□□□□ -1.73
LDLRP01130 MTND4P10-201ENST00000446199 1363 ntBASIC4.27□□□□□ -1.73
LDLRP01130 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.26□□□□□ -1.73
LDLRP01130 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LDLRP01130 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.26□□□□□ -1.73
LDLRP01130 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LDLRP01130 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.26□□□□□ -1.73
LDLRP01130 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.26□□□□□ -1.73
LDLRP01130 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LDLRP01130 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.26□□□□□ -1.73
LDLRP01130 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.26□□□□□ -1.73
LDLRP01130 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LDLRP01130 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LDLRP01130 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LDLRP01130 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LDLRP01130 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.26□□□□□ -1.73
LDLRP01130 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.26□□□□□ -1.73
LDLRP01130 RPL36AP36-201ENST00000418616 301 ntBASIC4.26□□□□□ -1.73
LDLRP01130 AC027644.1-201ENST00000419595 298 ntBASIC4.26□□□□□ -1.73
LDLRP01130 AL009174.1-201ENST00000426577 416 ntBASIC4.26□□□□□ -1.73
LDLRP01130 RAC1P8-201ENST00000427086 527 ntBASIC4.26□□□□□ -1.73
LDLRP01130 AC006946.1-201ENST00000429106 328 ntBASIC4.26□□□□□ -1.73
LDLRP01130 RPL7P4-203ENST00000430239 730 ntBASIC4.26□□□□□ -1.73
LDLRP01130 MOB1AP1-201ENST00000430903 535 ntBASIC4.26□□□□□ -1.73
LDLRP01130 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.26□□□□□ -1.73
LDLRP01130 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LDLRP01130 VN1R25P-201ENST00000443385 738 ntBASIC4.26□□□□□ -1.73
LDLRP01130 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.26□□□□□ -1.73
LDLRP01130 HMGB3P6-201ENST00000444896 598 ntBASIC4.26□□□□□ -1.73
LDLRP01130 H2AFZP5-201ENST00000446960 382 ntBASIC4.26□□□□□ -1.73
LDLRP01130 ISCUP1-201ENST00000454451 448 ntBASIC4.26□□□□□ -1.73
LDLRP01130 RPL23AP24-201ENST00000458203 385 ntBASIC4.26□□□□□ -1.73
LDLRP01130 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.26□□□□□ -1.73
LDLRP01130 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.26□□□□□ -1.73
LDLRP01130 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.26□□□□□ -1.73
LDLRP01130 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
LDLRP01130 HMGB3P13-201ENST00000511263 607 ntBASIC4.26□□□□□ -1.73
LDLRP01130 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.26□□□□□ -1.73
LDLRP01130 AL442163.2-201ENST00000553912 710 ntBASIC4.26□□□□□ -1.73
LDLRP01130 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.26□□□□□ -1.73
LDLRP01130 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.26□□□□□ -1.73
LDLRP01130 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.26□□□□□ -1.73
LDLRP01130 AC145350.1-201ENST00000567426 208 ntBASIC4.26□□□□□ -1.73
LDLRP01130 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
LDLRP01130 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.26□□□□□ -1.73
LDLRP01130 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.26□□□□□ -1.73
LDLRP01130 PCNAP1-202ENST00000595299 752 ntBASIC4.26□□□□□ -1.73
LDLRP01130 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.26□□□□□ -1.73
LDLRP01130 AL139395.1-201ENST00000603662 160 ntBASIC4.26□□□□□ -1.73
LDLRP01130 AC069304.3-201ENST00000603938 1084 ntBASIC4.26□□□□□ -1.73
LDLRP01130 AL031666.3-201ENST00000609320 1006 ntBASIC4.26□□□□□ -1.73
LDLRP01130 AC011330.2-201ENST00000621680 635 ntBASIC4.26□□□□□ -1.73
LDLRP01130 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.26□□□□□ -1.73
LDLRP01130 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.26□□□□□ -1.73
LDLRP01130 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.26□□□□□ -1.73
LDLRP01130 CDRT1-208ENST00000630868 794 ntBASIC4.26□□□□□ -1.73
LDLRP01130 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.26□□□□□ -1.73
LDLRP01130 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LDLRP01130 AC046144.1-201ENST00000478559 1853 ntBASIC4.26□□□□□ -1.73
LDLRP01130 AL442639.1-201ENST00000625030 1899 ntBASIC4.26□□□□□ -1.73
LDLRP01130 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.26□□□□□ -1.73
LDLRP01130 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LDLRP01130 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.26□□□□□ -1.73
LDLRP01130 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
LDLRP01130 NXPH1-205ENST00000602349 1953 ntBASIC4.25□□□□□ -1.73
LDLRP01130 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.25□□□□□ -1.73
LDLRP01130 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
LDLRP01130 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LDLRP01130 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
LDLRP01130 RNU1-87P-201ENST00000363727 170 ntBASIC4.25□□□□□ -1.73
LDLRP01130 RNU4-51P-201ENST00000364206 140 ntBASIC4.25□□□□□ -1.73
LDLRP01130 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LDLRP01130 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.25□□□□□ -1.73
LDLRP01130 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.25□□□□□ -1.73
LDLRP01130 RPS3AP37-201ENST00000419176 745 ntBASIC4.25□□□□□ -1.73
LDLRP01130 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.25□□□□□ -1.73
LDLRP01130 RPS12P10-201ENST00000427031 377 ntBASIC4.25□□□□□ -1.73
LDLRP01130 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.25□□□□□ -1.73
LDLRP01130 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.25□□□□□ -1.73
LDLRP01130 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.25□□□□□ -1.73
LDLRP01130 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
LDLRP01130 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.25□□□□□ -1.73
LDLRP01130 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.25□□□□□ -1.73
LDLRP01130 snoU13.22-201ENST00000459428 104 ntBASIC4.25□□□□□ -1.73
LDLRP01130 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.25□□□□□ -1.73
LDLRP01130 AC069528.1-202ENST00000482888 637 ntBASIC4.25□□□□□ -1.73
LDLRP01130 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.25□□□□□ -1.73
LDLRP01130 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.25□□□□□ -1.73
LDLRP01130 SAP18P1-201ENST00000512058 390 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms