Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 RNU4-6P-201ENST00000410804 122 ntBASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 AL353597.2-202ENST00000434901 373 ntBASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 AL450996.1-201ENST00000445574 1202 ntBASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 IGKV1OR-3-201ENST00000446944 348 ntBASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 UBBP5-201ENST00000446970 266 ntBASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 PCNPP5-201ENST00000452246 481 ntBASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 RPL23AP64-201ENST00000469465 435 ntBASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 AC022415.1-202ENST00000486612 523 ntBASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 RPS27P20-201ENST00000492051 246 ntBASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 HSPD1P15-201ENST00000505573 1122 ntBASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 IGHV3-57-201ENST00000520143 280 ntBASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 COX6CP8-201ENST00000522620 226 ntBASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 RRN3P3-201ENST00000549207 578 ntBASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 AC090502.2-201ENST00000549267 280 ntBASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 MIR5095-201ENST00000578844 88 ntBASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 AC009237.17-201ENST00000618111 748 ntBASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 AC022400.9-201ENST00000623633 273 ntBASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 CASC19-228ENST00000641414 1684 ntBASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CUEDC1Q9NWM3 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 PHKBP1-201ENST00000450951 1951 ntBASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 RN7SKP237-201ENST00000364663 301 ntBASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 RNY1P14-201ENST00000384426 108 ntBASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 RNU6-310P-201ENST00000384655 107 ntBASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 RNA5SP115-201ENST00000411160 107 ntBASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 AL929472.1-201ENST00000417484 429 ntBASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 AC137499.1-201ENST00000427602 88 ntBASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 DNAJC19P5-201ENST00000443295 316 ntBASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 AC234771.2-201ENST00000445718 597 ntBASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 EIF4A1P11-201ENST00000451239 222 ntBASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 AC104339.1-201ENST00000465478 348 ntBASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 UBFD1P1-201ENST00000473259 814 ntBASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 SCARNA24.1-201ENST00000516465 137 ntBASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 Y_RNA.721-201ENST00000517207 102 ntBASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 CASP1-212ENST00000531166 300 ntTSL 5 BASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 AP000857.1-201ENST00000532151 543 ntBASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 AC026956.1-201ENST00000558741 396 ntBASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 AC018552.3-201ENST00000567416 561 ntBASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 AC012409.4-201ENST00000612923 249 ntBASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 AC004241.2-201ENST00000614562 444 ntBASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 AC243312.2-201ENST00000623340 601 ntBASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 AC023245.2-201ENST00000530760 2978 ntBASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CUEDC1Q9NWM3 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CUEDC1Q9NWM3 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms