Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.82□□□□□ -1.64
KRT78Q8N1N4 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.82□□□□□ -1.64
KRT78Q8N1N4 AC006499.2-201ENST00000513470 337 ntBASIC4.82□□□□□ -1.64
KRT78Q8N1N4 RN7SKP66-201ENST00000516681 231 ntBASIC4.82□□□□□ -1.64
KRT78Q8N1N4 AC104986.1-201ENST00000517978 436 ntBASIC4.82□□□□□ -1.64
KRT78Q8N1N4 AC008802.1-201ENST00000519121 791 ntBASIC4.82□□□□□ -1.64
KRT78Q8N1N4 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.82□□□□□ -1.64
KRT78Q8N1N4 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.82□□□□□ -1.64
KRT78Q8N1N4 AC012339.2-201ENST00000523996 453 ntBASIC4.82□□□□□ -1.64
KRT78Q8N1N4 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.82□□□□□ -1.64
KRT78Q8N1N4 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.82□□□□□ -1.64
KRT78Q8N1N4 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.82□□□□□ -1.64
KRT78Q8N1N4 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.82□□□□□ -1.64
KRT78Q8N1N4 OR11J2P-201ENST00000555298 907 ntBASIC4.82□□□□□ -1.64
KRT78Q8N1N4 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.82□□□□□ -1.64
KRT78Q8N1N4 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.82□□□□□ -1.64
KRT78Q8N1N4 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.82□□□□□ -1.64
KRT78Q8N1N4 AF131215.7-201ENST00000602443 707 ntBASIC4.82□□□□□ -1.64
KRT78Q8N1N4 OR2AS2P-201ENST00000606902 342 ntBASIC4.82□□□□□ -1.64
KRT78Q8N1N4 AC024560.3-201ENST00000608482 349 ntBASIC4.82□□□□□ -1.64
KRT78Q8N1N4 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.82□□□□□ -1.64
KRT78Q8N1N4 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.82□□□□□ -1.64
KRT78Q8N1N4 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
KRT78Q8N1N4 AC009704.2-201ENST00000618739 483 ntBASIC4.82□□□□□ -1.64
KRT78Q8N1N4 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.82□□□□□ -1.64
KRT78Q8N1N4 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
KRT78Q8N1N4 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRT78Q8N1N4 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.82□□□□□ -1.64
KRT78Q8N1N4 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
KRT78Q8N1N4 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KRT78Q8N1N4 MTCO1P23-201ENST00000415223 1526 ntBASIC4.82□□□□□ -1.64
KRT78Q8N1N4 ZNF734P-201ENST00000419494 1534 ntBASIC4.82□□□□□ -1.64
KRT78Q8N1N4 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRT78Q8N1N4 NCLP2-201ENST00000416078 1462 ntBASIC4.81□□□□□ -1.64
KRT78Q8N1N4 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRT78Q8N1N4 AL356473.1-201ENST00000406203 1408 ntBASIC4.81□□□□□ -1.64
KRT78Q8N1N4 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
KRT78Q8N1N4 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.81□□□□□ -1.64
KRT78Q8N1N4 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.81□□□□□ -1.64
KRT78Q8N1N4 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRT78Q8N1N4 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.81□□□□□ -1.64
KRT78Q8N1N4 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
KRT78Q8N1N4 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.81□□□□□ -1.64
KRT78Q8N1N4 RNA5SP455-201ENST00000365190 119 ntBASIC4.81□□□□□ -1.64
KRT78Q8N1N4 RNU6-723P-201ENST00000383973 107 ntBASIC4.81□□□□□ -1.64
KRT78Q8N1N4 MIR153-1-201ENST00000384914 90 ntBASIC4.81□□□□□ -1.64
KRT78Q8N1N4 MT-TC-201ENST00000387405 66 ntBASIC4.81□□□□□ -1.64
KRT78Q8N1N4 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.81□□□□□ -1.64
KRT78Q8N1N4 HMGB1P17-201ENST00000403495 628 ntBASIC4.81□□□□□ -1.64
KRT78Q8N1N4 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.81□□□□□ -1.64
KRT78Q8N1N4 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.81□□□□□ -1.64
KRT78Q8N1N4 MTND1P30-201ENST00000441241 901 ntBASIC4.81□□□□□ -1.64
KRT78Q8N1N4 RPL7AP61-201ENST00000443410 636 ntBASIC4.81□□□□□ -1.64
KRT78Q8N1N4 PAXBP1P1-201ENST00000449315 447 ntBASIC4.81□□□□□ -1.64
KRT78Q8N1N4 TCEA1P1-201ENST00000449716 880 ntBASIC4.81□□□□□ -1.64
KRT78Q8N1N4 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.81□□□□□ -1.64
KRT78Q8N1N4 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.81□□□□□ -1.64
KRT78Q8N1N4 AL691482.1-201ENST00000453255 87 ntBASIC4.81□□□□□ -1.64
KRT78Q8N1N4 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.81□□□□□ -1.64
KRT78Q8N1N4 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC4.81□□□□□ -1.64
KRT78Q8N1N4 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.81□□□□□ -1.64
KRT78Q8N1N4 GYG1P1-201ENST00000460864 698 ntBASIC4.81□□□□□ -1.64
KRT78Q8N1N4 RN7SL629P-201ENST00000489622 285 ntBASIC4.81□□□□□ -1.64
KRT78Q8N1N4 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.81□□□□□ -1.64
KRT78Q8N1N4 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.81□□□□□ -1.64
KRT78Q8N1N4 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.81□□□□□ -1.64
KRT78Q8N1N4 AC022861.1-201ENST00000522981 663 ntBASIC4.81□□□□□ -1.64
KRT78Q8N1N4 AC105233.3-201ENST00000531125 744 ntBASIC4.81□□□□□ -1.64
KRT78Q8N1N4 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRT78Q8N1N4 AC137768.1-201ENST00000549998 553 ntBASIC4.81□□□□□ -1.64
KRT78Q8N1N4 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.81□□□□□ -1.64
KRT78Q8N1N4 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.81□□□□□ -1.64
KRT78Q8N1N4 RN7SL753P-201ENST00000581238 290 ntBASIC4.81□□□□□ -1.64
KRT78Q8N1N4 KPNA2P3-201ENST00000584190 848 ntBASIC4.81□□□□□ -1.64
KRT78Q8N1N4 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.81□□□□□ -1.64
KRT78Q8N1N4 AC006116.3-201ENST00000592968 361 ntBASIC4.81□□□□□ -1.64
KRT78Q8N1N4 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.81□□□□□ -1.64
KRT78Q8N1N4 RPL23AP92-201ENST00000603609 255 ntBASIC4.81□□□□□ -1.64
KRT78Q8N1N4 AC011939.3-201ENST00000613686 466 ntBASIC4.81□□□□□ -1.64
KRT78Q8N1N4 AL049794.2-201ENST00000616301 365 ntBASIC4.81□□□□□ -1.64
KRT78Q8N1N4 AC099669.2-201ENST00000616549 437 ntBASIC4.81□□□□□ -1.64
KRT78Q8N1N4 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.81□□□□□ -1.64
KRT78Q8N1N4 AC019206.1-201ENST00000621938 425 ntBASIC4.81□□□□□ -1.64
KRT78Q8N1N4 AP006248.2-201ENST00000623309 592 ntBASIC4.81□□□□□ -1.64
KRT78Q8N1N4 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.81□□□□□ -1.64
KRT78Q8N1N4 BMS1P21-201ENST00000634565 365 ntBASIC4.81□□□□□ -1.64
KRT78Q8N1N4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRT78Q8N1N4 SAGE4P-201ENST00000442271 3381 ntBASIC4.81□□□□□ -1.64
KRT78Q8N1N4 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRT78Q8N1N4 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRT78Q8N1N4 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
KRT78Q8N1N4 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRT78Q8N1N4 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.81□□□□□ -1.64
KRT78Q8N1N4 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KRT78Q8N1N4 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KRT78Q8N1N4 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.8□□□□□ -1.64
KRT78Q8N1N4 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KRT78Q8N1N4 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KRT78Q8N1N4 Z98755.1-201ENST00000407015 1384 ntBASIC4.8□□□□□ -1.64
KRT78Q8N1N4 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms