Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.97□□□□□ -1.77
NUP98P52948 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NUP98P52948 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.97□□□□□ -1.77
NUP98P52948 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
NUP98P52948 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.96□□□□□ -1.78
NUP98P52948 AC107083.1-201ENST00000439643 279 ntBASIC3.96□□□□□ -1.78
NUP98P52948 RPS12P18-201ENST00000442381 270 ntBASIC3.96□□□□□ -1.78
NUP98P52948 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.96□□□□□ -1.78
NUP98P52948 FTH1P9-201ENST00000513251 355 ntBASIC3.96□□□□□ -1.78
NUP98P52948 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.96□□□□□ -1.78
NUP98P52948 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC3.96□□□□□ -1.78
NUP98P52948 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC3.96□□□□□ -1.78
NUP98P52948 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.96□□□□□ -1.78
NUP98P52948 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.96□□□□□ -1.78
NUP98P52948 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.96□□□□□ -1.78
NUP98P52948 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.96□□□□□ -1.78
NUP98P52948 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.96□□□□□ -1.78
NUP98P52948 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.96□□□□□ -1.78
NUP98P52948 IGHV3-29-201ENST00000604817 344 ntBASIC3.96□□□□□ -1.78
NUP98P52948 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
NUP98P52948 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
NUP98P52948 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NUP98P52948 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NUP98P52948 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NUP98P52948 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.96□□□□□ -1.78
NUP98P52948 AL672296.1-201ENST00000427780 2158 ntBASIC3.96□□□□□ -1.78
NUP98P52948 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.95□□□□□ -1.78
NUP98P52948 COTL1P1-201ENST00000422309 375 ntBASIC3.95□□□□□ -1.78
NUP98P52948 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.95□□□□□ -1.78
NUP98P52948 RPS3AP43-201ENST00000479743 781 ntBASIC3.95□□□□□ -1.78
NUP98P52948 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.95□□□□□ -1.78
NUP98P52948 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.95□□□□□ -1.78
NUP98P52948 AC034105.3-201ENST00000565294 442 ntBASIC3.95□□□□□ -1.78
NUP98P52948 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.95□□□□□ -1.78
NUP98P52948 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.95□□□□□ -1.78
NUP98P52948 AC006504.3-201ENST00000586818 523 ntBASIC3.95□□□□□ -1.78
NUP98P52948 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.95□□□□□ -1.78
NUP98P52948 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.95□□□□□ -1.78
NUP98P52948 uc_338.32-201ENST00000615087 172 ntBASIC3.95□□□□□ -1.78
NUP98P52948 AC099654.11-201ENST00000638857 294 ntBASIC3.95□□□□□ -1.78
NUP98P52948 SAGE4P-201ENST00000442271 3381 ntBASIC3.95□□□□□ -1.78
NUP98P52948 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NUP98P52948 OR5AQ1P-202ENST00000641257 1534 ntBASIC3.95□□□□□ -1.78
NUP98P52948 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
NUP98P52948 MIR422A-201ENST00000362286 90 ntBASIC3.95□□□□□ -1.78
NUP98P52948 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.95□□□□□ -1.78
NUP98P52948 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NUP98P52948 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.95□□□□□ -1.78
NUP98P52948 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC3.95□□□□□ -1.78
NUP98P52948 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NUP98P52948 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC3.95□□□□□ -1.78
NUP98P52948 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.95□□□□□ -1.78
NUP98P52948 RNU6-84P-201ENST00000607737 102 ntBASIC3.95□□□□□ -1.78
NUP98P52948 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.95□□□□□ -1.78
NUP98P52948 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NUP98P52948 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NUP98P52948 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NUP98P52948 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NUP98P52948 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NUP98P52948 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.94□□□□□ -1.78
NUP98P52948 AC008065.1-201ENST00000428525 348 ntBASIC3.94□□□□□ -1.78
NUP98P52948 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC3.94□□□□□ -1.78
NUP98P52948 AC135999.1-201ENST00000478962 479 ntBASIC3.94□□□□□ -1.78
NUP98P52948 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.94□□□□□ -1.78
NUP98P52948 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.94□□□□□ -1.78
NUP98P52948 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.94□□□□□ -1.78
NUP98P52948 MTCO3P22-201ENST00000603219 784 ntBASIC3.94□□□□□ -1.78
NUP98P52948 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.94□□□□□ -1.78
NUP98P52948 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.94□□□□□ -1.78
NUP98P52948 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NUP98P52948 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.94□□□□□ -1.78
NUP98P52948 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.94□□□□□ -1.78
NUP98P52948 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
NUP98P52948 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NUP98P52948 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NUP98P52948 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NUP98P52948 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC3.93□□□□□ -1.78
NUP98P52948 OR5H2-201ENST00000355273 945 ntBASIC3.93□□□□□ -1.78
NUP98P52948 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
NUP98P52948 SNORA80A-201ENST00000363922 136 ntBASIC3.93□□□□□ -1.78
NUP98P52948 XIST-201ENST00000416330 750 ntTSL 2 BASIC3.93□□□□□ -1.78
NUP98P52948 AC112492.1-201ENST00000449607 712 ntBASIC3.93□□□□□ -1.78
NUP98P52948 AC091544.1-201ENST00000484702 348 ntBASIC3.93□□□□□ -1.78
NUP98P52948 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.93□□□□□ -1.78
NUP98P52948 AC233280.2-201ENST00000603917 1070 ntBASIC3.93□□□□□ -1.78
NUP98P52948 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC3.93□□□□□ -1.78
NUP98P52948 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.93□□□□□ -1.78
NUP98P52948 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NUP98P52948 AP002088.1-201ENST00000382740 395 ntBASIC3.93□□□□□ -1.78
NUP98P52948 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NUP98P52948 AC021205.2-201ENST00000480069 347 ntBASIC3.93□□□□□ -1.78
NUP98P52948 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.93□□□□□ -1.78
NUP98P52948 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.93□□□□□ -1.78
NUP98P52948 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.93□□□□□ -1.78
NUP98P52948 AC018552.3-201ENST00000567416 561 ntBASIC3.93□□□□□ -1.78
NUP98P52948 MIR622-201ENST00000638396 96 ntBASIC3.93□□□□□ -1.78
NUP98P52948 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
NUP98P52948 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NUP98P52948 HSPA8P1-201ENST00000425843 1833 ntBASIC3.92□□□□□ -1.78
NUP98P52948 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms