Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC068339.2-201ENST00000534395 618 ntBASIC4.3□□□□□ -1.72
NEDD4P46934 AC104229.1-201ENST00000561364 255 ntBASIC4.3□□□□□ -1.72
NEDD4P46934 CD24P2-201ENST00000565486 219 ntBASIC4.3□□□□□ -1.72
NEDD4P46934 AC104072.1-201ENST00000568817 668 ntBASIC4.3□□□□□ -1.72
NEDD4P46934 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.3□□□□□ -1.72
NEDD4P46934 MIR1254-2-201ENST00000579553 63 ntBASIC4.3□□□□□ -1.72
NEDD4P46934 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.3□□□□□ -1.72
NEDD4P46934 AC245389.1-201ENST00000605141 529 ntBASIC4.3□□□□□ -1.72
NEDD4P46934 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.3□□□□□ -1.72
NEDD4P46934 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.3□□□□□ -1.72
NEDD4P46934 AL138955.1-201ENST00000622881 1040 ntBASIC4.3□□□□□ -1.72
NEDD4P46934 AC093875.1-201ENST00000623688 504 ntBASIC4.3□□□□□ -1.72
NEDD4P46934 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
NEDD4P46934 AC244205.2-202ENST00000635781 342 ntBASIC4.3□□□□□ -1.72
NEDD4P46934 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NEDD4P46934 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.3□□□□□ -1.72
NEDD4P46934 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.3□□□□□ -1.72
NEDD4P46934 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NEDD4P46934 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
NEDD4P46934 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NEDD4P46934 AC073073.2-201ENST00000609827 2578 ntBASIC4.29□□□□□ -1.72
NEDD4P46934 AC093775.1-201ENST00000624154 1868 ntBASIC4.29□□□□□ -1.72
NEDD4P46934 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.29□□□□□ -1.72
NEDD4P46934 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NEDD4P46934 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.29□□□□□ -1.72
NEDD4P46934 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NEDD4P46934 HMGB1P13-201ENST00000406019 642 ntBASIC4.29□□□□□ -1.72
NEDD4P46934 RN7SKP56-201ENST00000410513 331 ntBASIC4.29□□□□□ -1.72
NEDD4P46934 AL158825.1-201ENST00000414735 521 ntBASIC4.29□□□□□ -1.72
NEDD4P46934 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.29□□□□□ -1.72
NEDD4P46934 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NEDD4P46934 PNRC2P1-201ENST00000423940 420 ntBASIC4.29□□□□□ -1.72
NEDD4P46934 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.29□□□□□ -1.72
NEDD4P46934 HMGB3P9-201ENST00000441799 583 ntBASIC4.29□□□□□ -1.72
NEDD4P46934 AC069540.1-201ENST00000446320 988 ntBASIC4.29□□□□□ -1.72
NEDD4P46934 AC092685.1-201ENST00000447960 1243 ntBASIC4.29□□□□□ -1.72
NEDD4P46934 AL591363.1-201ENST00000450091 483 ntBASIC4.29□□□□□ -1.72
NEDD4P46934 AC099563.1-201ENST00000456086 418 ntBASIC4.29□□□□□ -1.72
NEDD4P46934 AC008379.1-201ENST00000463655 464 ntBASIC4.29□□□□□ -1.72
NEDD4P46934 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC4.29□□□□□ -1.72
NEDD4P46934 AC133963.2-201ENST00000513686 578 ntBASIC4.29□□□□□ -1.72
NEDD4P46934 AC026403.1-201ENST00000518938 295 ntBASIC4.29□□□□□ -1.72
NEDD4P46934 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.29□□□□□ -1.72
NEDD4P46934 MTND5P21-201ENST00000531961 522 ntBASIC4.29□□□□□ -1.72
NEDD4P46934 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NEDD4P46934 AC008083.2-201ENST00000546707 476 ntBASIC4.29□□□□□ -1.72
NEDD4P46934 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.29□□□□□ -1.72
NEDD4P46934 AC099489.2-201ENST00000574976 260 ntBASIC4.29□□□□□ -1.72
NEDD4P46934 AC008759.3-201ENST00000613300 508 ntBASIC4.29□□□□□ -1.72
NEDD4P46934 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.29□□□□□ -1.72
NEDD4P46934 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
NEDD4P46934 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NEDD4P46934 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.29□□□□□ -1.72
NEDD4P46934 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
NEDD4P46934 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NEDD4P46934 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.28□□□□□ -1.72
NEDD4P46934 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.28□□□□□ -1.72
NEDD4P46934 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.28□□□□□ -1.72
NEDD4P46934 HSPA8P17-201ENST00000427029 1382 ntBASIC4.28□□□□□ -1.72
NEDD4P46934 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NEDD4P46934 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
NEDD4P46934 RNU6-225P-201ENST00000384613 103 ntBASIC4.28□□□□□ -1.72
NEDD4P46934 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.28□□□□□ -1.72
NEDD4P46934 RN7SKP222-201ENST00000410651 315 ntBASIC4.28□□□□□ -1.72
NEDD4P46934 RN7SKP27-201ENST00000410684 333 ntBASIC4.28□□□□□ -1.72
NEDD4P46934 AC010385.1-201ENST00000412374 256 ntBASIC4.28□□□□□ -1.72
NEDD4P46934 SDCBPP2-201ENST00000424643 885 ntBASIC4.28□□□□□ -1.72
NEDD4P46934 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.28□□□□□ -1.72
NEDD4P46934 AC091286.1-201ENST00000431233 461 ntBASIC4.28□□□□□ -1.72
NEDD4P46934 MTCO1P52-201ENST00000433928 531 ntBASIC4.28□□□□□ -1.72
NEDD4P46934 AP000936.3-201ENST00000438127 255 ntBASIC4.28□□□□□ -1.72
NEDD4P46934 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.28□□□□□ -1.72
NEDD4P46934 AC007537.2-201ENST00000472093 511 ntBASIC4.28□□□□□ -1.72
NEDD4P46934 CYCSP20-201ENST00000473154 315 ntBASIC4.28□□□□□ -1.72
NEDD4P46934 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.28□□□□□ -1.72
NEDD4P46934 HMGN1P11-201ENST00000508668 303 ntBASIC4.28□□□□□ -1.72
NEDD4P46934 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.28□□□□□ -1.72
NEDD4P46934 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.28□□□□□ -1.72
NEDD4P46934 RN7SKP83-201ENST00000516512 178 ntBASIC4.28□□□□□ -1.72
NEDD4P46934 AF186190.1-201ENST00000517470 480 ntBASIC4.28□□□□□ -1.72
NEDD4P46934 RANP9-201ENST00000519957 271 ntBASIC4.28□□□□□ -1.72
NEDD4P46934 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.28□□□□□ -1.72
NEDD4P46934 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.28□□□□□ -1.72
NEDD4P46934 AC106734.1-201ENST00000568646 663 ntBASIC4.28□□□□□ -1.72
NEDD4P46934 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.28□□□□□ -1.72
NEDD4P46934 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.28□□□□□ -1.72
NEDD4P46934 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.28□□□□□ -1.72
NEDD4P46934 KLKP1-201ENST00000595979 403 ntBASIC4.28□□□□□ -1.72
NEDD4P46934 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NEDD4P46934 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.28□□□□□ -1.72
NEDD4P46934 AC018618.2-201ENST00000604770 446 ntBASIC4.28□□□□□ -1.72
NEDD4P46934 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NEDD4P46934 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NEDD4P46934 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.28□□□□□ -1.72
NEDD4P46934 AL034408.1-202ENST00000636088 415 ntBASIC4.28□□□□□ -1.72
NEDD4P46934 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NEDD4P46934 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.28□□□□□ -1.72
NEDD4P46934 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.28□□□□□ -1.72
NEDD4P46934 AC006504.1-201ENST00000562493 3666 ntBASIC4.28□□□□□ -1.72
NEDD4P46934 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms