Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.12□□□□□ -1.91
UPK1BO75841 AL162233.1-201ENST00000620014 944 ntBASIC3.12□□□□□ -1.91
UPK1BO75841 AL732618.1-201ENST00000623251 301 ntBASIC3.12□□□□□ -1.91
UPK1BO75841 AC090617.9-201ENST00000623751 147 ntBASIC3.12□□□□□ -1.91
UPK1BO75841 AC073476.4-201ENST00000628409 72 ntBASIC3.12□□□□□ -1.91
UPK1BO75841 FAM157B-203ENST00000639350 358 ntBASIC3.12□□□□□ -1.91
UPK1BO75841 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
UPK1BO75841 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
UPK1BO75841 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
UPK1BO75841 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.12□□□□□ -1.91
UPK1BO75841 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
UPK1BO75841 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
UPK1BO75841 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
UPK1BO75841 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.11□□□□□ -1.91
UPK1BO75841 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC3.11□□□□□ -1.91
UPK1BO75841 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
UPK1BO75841 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
UPK1BO75841 RNU11-4P-201ENST00000391149 133 ntBASIC3.11□□□□□ -1.91
UPK1BO75841 AC007899.1-201ENST00000412776 775 ntBASIC3.11□□□□□ -1.91
UPK1BO75841 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC3.11□□□□□ -1.91
UPK1BO75841 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.11□□□□□ -1.91
UPK1BO75841 AC023128.2-201ENST00000420880 1223 ntBASIC3.11□□□□□ -1.91
UPK1BO75841 ARL2BPP3-201ENST00000421226 480 ntBASIC3.11□□□□□ -1.91
UPK1BO75841 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.11□□□□□ -1.91
UPK1BO75841 EIF2S2P3-201ENST00000428356 999 ntBASIC3.11□□□□□ -1.91
UPK1BO75841 AC002069.1-201ENST00000429649 1159 ntBASIC3.11□□□□□ -1.91
UPK1BO75841 PSMA2P3-201ENST00000429685 675 ntBASIC3.11□□□□□ -1.91
UPK1BO75841 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
UPK1BO75841 RPL23AP33-201ENST00000442301 452 ntBASIC3.11□□□□□ -1.91
UPK1BO75841 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.11□□□□□ -1.91
UPK1BO75841 AC144530.1-201ENST00000452862 555 ntBASIC3.11□□□□□ -1.91
UPK1BO75841 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.11□□□□□ -1.91
UPK1BO75841 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.11□□□□□ -1.91
UPK1BO75841 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.11□□□□□ -1.91
UPK1BO75841 AC005532.2-201ENST00000467154 373 ntBASIC3.11□□□□□ -1.91
UPK1BO75841 AC092451.1-201ENST00000480211 153 ntBASIC3.11□□□□□ -1.91
UPK1BO75841 AC126121.1-201ENST00000482313 553 ntBASIC3.11□□□□□ -1.91
UPK1BO75841 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.11□□□□□ -1.91
UPK1BO75841 OR5H3P-201ENST00000502817 919 ntBASIC3.11□□□□□ -1.91
UPK1BO75841 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.11□□□□□ -1.91
UPK1BO75841 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.11□□□□□ -1.91
UPK1BO75841 ATP5LP3-201ENST00000514223 304 ntBASIC3.11□□□□□ -1.91
UPK1BO75841 AC107934.2-201ENST00000518653 310 ntBASIC3.11□□□□□ -1.91
UPK1BO75841 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.11□□□□□ -1.91
UPK1BO75841 NDUFA5P2-201ENST00000519723 344 ntBASIC3.11□□□□□ -1.91
UPK1BO75841 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.11□□□□□ -1.91
UPK1BO75841 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.11□□□□□ -1.91
UPK1BO75841 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.11□□□□□ -1.91
UPK1BO75841 CIR1P1-201ENST00000524055 1133 ntBASIC3.11□□□□□ -1.91
UPK1BO75841 C1DP5-201ENST00000525775 383 ntBASIC3.11□□□□□ -1.91
UPK1BO75841 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.11□□□□□ -1.91
UPK1BO75841 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.11□□□□□ -1.91
UPK1BO75841 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.11□□□□□ -1.91
UPK1BO75841 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.11□□□□□ -1.91
UPK1BO75841 MTATP6P25-201ENST00000574491 261 ntBASIC3.11□□□□□ -1.91
UPK1BO75841 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
UPK1BO75841 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.11□□□□□ -1.91
UPK1BO75841 MIR4506-201ENST00000584693 77 ntBASIC3.11□□□□□ -1.91
UPK1BO75841 YWHAQP7-201ENST00000603536 658 ntBASIC3.11□□□□□ -1.91
UPK1BO75841 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.11□□□□□ -1.91
UPK1BO75841 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
UPK1BO75841 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.11□□□□□ -1.91
UPK1BO75841 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
UPK1BO75841 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
UPK1BO75841 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
UPK1BO75841 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC3.1□□□□□ -1.91
UPK1BO75841 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
UPK1BO75841 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.1□□□□□ -1.91
UPK1BO75841 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
UPK1BO75841 AC016716.1-201ENST00000265882 708 ntBASIC3.1□□□□□ -1.91
UPK1BO75841 RNU1-132P-201ENST00000364300 164 ntBASIC3.1□□□□□ -1.91
UPK1BO75841 RNA5SP87-201ENST00000384155 118 ntBASIC3.1□□□□□ -1.91
UPK1BO75841 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
UPK1BO75841 AL161909.1-201ENST00000397390 712 ntBASIC3.1□□□□□ -1.91
UPK1BO75841 PRRC2CP1-201ENST00000404428 159 ntBASIC3.1□□□□□ -1.91
UPK1BO75841 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.1□□□□□ -1.91
UPK1BO75841 Z97055.1-201ENST00000419730 712 ntBASIC3.1□□□□□ -1.91
UPK1BO75841 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.1□□□□□ -1.91
UPK1BO75841 AC068287.1-201ENST00000430283 295 ntBASIC3.1□□□□□ -1.91
UPK1BO75841 AC244505.4-201ENST00000434905 287 ntBASIC3.1□□□□□ -1.91
UPK1BO75841 RPS3AP54-201ENST00000435535 734 ntBASIC3.1□□□□□ -1.91
UPK1BO75841 SSXP5-201ENST00000443473 287 ntBASIC3.1□□□□□ -1.91
UPK1BO75841 RPL29P29-201ENST00000448725 423 ntBASIC3.1□□□□□ -1.91
UPK1BO75841 MRPL35P4-201ENST00000453682 566 ntBASIC3.1□□□□□ -1.91
UPK1BO75841 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.1□□□□□ -1.91
UPK1BO75841 RPSAP50-201ENST00000481955 852 ntBASIC3.1□□□□□ -1.91
UPK1BO75841 AP001086.1-201ENST00000494882 321 ntBASIC3.1□□□□□ -1.91
UPK1BO75841 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
UPK1BO75841 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.1□□□□□ -1.91
UPK1BO75841 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.1□□□□□ -1.91
UPK1BO75841 HIGD1AP3-201ENST00000515857 278 ntBASIC3.1□□□□□ -1.91
UPK1BO75841 RNA5SP385-201ENST00000515947 110 ntBASIC3.1□□□□□ -1.91
UPK1BO75841 RNU2-58P-201ENST00000516403 183 ntBASIC3.1□□□□□ -1.91
UPK1BO75841 RNA5SP92-201ENST00000516437 110 ntBASIC3.1□□□□□ -1.91
UPK1BO75841 RNA5SP164-201ENST00000516533 110 ntBASIC3.1□□□□□ -1.91
UPK1BO75841 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.1□□□□□ -1.91
UPK1BO75841 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
UPK1BO75841 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.1□□□□□ -1.91
UPK1BO75841 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.1□□□□□ -1.91
UPK1BO75841 CKS1BP1-201ENST00000555221 240 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms