Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
ABCA3Q99758 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ABCA3Q99758 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.35□□□□□ -1.71
ABCA3Q99758 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.35□□□□□ -1.71
ABCA3Q99758 AC140076.1-201ENST00000449897 361 ntBASIC4.35□□□□□ -1.71
ABCA3Q99758 BTF3L4P4-201ENST00000506381 449 ntBASIC4.35□□□□□ -1.71
ABCA3Q99758 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.35□□□□□ -1.71
ABCA3Q99758 RN7SKP132-201ENST00000516001 208 ntBASIC4.35□□□□□ -1.71
ABCA3Q99758 RNA5SP154-201ENST00000516193 111 ntBASIC4.35□□□□□ -1.71
ABCA3Q99758 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.35□□□□□ -1.71
ABCA3Q99758 COX6B1P6-201ENST00000522347 255 ntBASIC4.35□□□□□ -1.71
ABCA3Q99758 OR10D4P-201ENST00000525892 951 ntBASIC4.35□□□□□ -1.71
ABCA3Q99758 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ABCA3Q99758 AL390838.2-201ENST00000602394 274 ntBASIC4.35□□□□□ -1.71
ABCA3Q99758 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.35□□□□□ -1.71
ABCA3Q99758 AL590240.3-201ENST00000621416 943 ntBASIC4.35□□□□□ -1.71
ABCA3Q99758 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ABCA3Q99758 AL356489.2-201ENST00000566968 3528 ntBASIC4.34□□□□□ -1.71
ABCA3Q99758 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
ABCA3Q99758 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
ABCA3Q99758 SETP5-201ENST00000437270 562 ntBASIC4.34□□□□□ -1.71
ABCA3Q99758 HMGB3P22-202ENST00000451823 572 ntBASIC4.34□□□□□ -1.71
ABCA3Q99758 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC4.34□□□□□ -1.71
ABCA3Q99758 AC025445.1-201ENST00000502728 300 ntBASIC4.34□□□□□ -1.71
ABCA3Q99758 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
ABCA3Q99758 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.34□□□□□ -1.71
ABCA3Q99758 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.34□□□□□ -1.71
ABCA3Q99758 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ABCA3Q99758 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.34□□□□□ -1.71
ABCA3Q99758 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.34□□□□□ -1.71
ABCA3Q99758 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.34□□□□□ -1.71
ABCA3Q99758 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ABCA3Q99758 TTC39DP-201ENST00000416781 1688 ntBASIC4.34□□□□□ -1.72
ABCA3Q99758 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.34□□□□□ -1.72
ABCA3Q99758 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ABCA3Q99758 AC068647.1-201ENST00000489539 2265 ntBASIC4.33□□□□□ -1.72
ABCA3Q99758 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ABCA3Q99758 CR383658.2-201ENST00000547576 1525 ntBASIC4.33□□□□□ -1.72
ABCA3Q99758 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
ABCA3Q99758 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
ABCA3Q99758 RNA5SP235-201ENST00000365411 114 ntBASIC4.33□□□□□ -1.72
ABCA3Q99758 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.33□□□□□ -1.72
ABCA3Q99758 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.33□□□□□ -1.72
ABCA3Q99758 USP12PY-201ENST00000427677 1064 ntBASIC4.33□□□□□ -1.72
ABCA3Q99758 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.33□□□□□ -1.72
ABCA3Q99758 RPSAP41-201ENST00000439695 860 ntBASIC4.33□□□□□ -1.72
ABCA3Q99758 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.33□□□□□ -1.72
ABCA3Q99758 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ABCA3Q99758 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.33□□□□□ -1.72
ABCA3Q99758 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.33□□□□□ -1.72
ABCA3Q99758 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC4.33□□□□□ -1.72
ABCA3Q99758 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.33□□□□□ -1.72
ABCA3Q99758 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.33□□□□□ -1.72
ABCA3Q99758 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
ABCA3Q99758 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.33□□□□□ -1.72
ABCA3Q99758 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.33□□□□□ -1.72
ABCA3Q99758 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ABCA3Q99758 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
ABCA3Q99758 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.33□□□□□ -1.72
ABCA3Q99758 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
ABCA3Q99758 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ABCA3Q99758 U3.12-201ENST00000364498 214 ntBASIC4.32□□□□□ -1.72
ABCA3Q99758 RPS24P12-201ENST00000402084 394 ntBASIC4.32□□□□□ -1.72
ABCA3Q99758 RNA5SP296-201ENST00000410523 111 ntBASIC4.32□□□□□ -1.72
ABCA3Q99758 AL445213.1-201ENST00000412589 747 ntBASIC4.32□□□□□ -1.72
ABCA3Q99758 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.32□□□□□ -1.72
ABCA3Q99758 SEPT7P3-201ENST00000455017 621 ntBASIC4.32□□□□□ -1.72
ABCA3Q99758 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.32□□□□□ -1.72
ABCA3Q99758 AC116158.1-201ENST00000560231 2129 ntBASIC4.32□□□□□ -1.72
ABCA3Q99758 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.32□□□□□ -1.72
ABCA3Q99758 VN1R90P-201ENST00000595717 726 ntBASIC4.32□□□□□ -1.72
ABCA3Q99758 TUG1_1.1-201ENST00000610654 145 ntBASIC4.32□□□□□ -1.72
ABCA3Q99758 MIR486-1-201ENST00000612171 68 ntBASIC4.32□□□□□ -1.72
ABCA3Q99758 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.32□□□□□ -1.72
ABCA3Q99758 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.32□□□□□ -1.72
ABCA3Q99758 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.32□□□□□ -1.72
ABCA3Q99758 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ABCA3Q99758 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ABCA3Q99758 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.32□□□□□ -1.72
ABCA3Q99758 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
ABCA3Q99758 HMGB3P9-201ENST00000441799 583 ntBASIC4.32□□□□□ -1.72
ABCA3Q99758 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
ABCA3Q99758 RPL37P4-201ENST00000448908 268 ntBASIC4.32□□□□□ -1.72
ABCA3Q99758 RPL31P50-201ENST00000471002 296 ntBASIC4.32□□□□□ -1.72
ABCA3Q99758 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.32□□□□□ -1.72
ABCA3Q99758 NPM1P29-201ENST00000483112 803 ntBASIC4.32□□□□□ -1.72
ABCA3Q99758 RPS26P15-201ENST00000488067 348 ntBASIC4.32□□□□□ -1.72
ABCA3Q99758 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.32□□□□□ -1.72
ABCA3Q99758 AC231759.1-201ENST00000616455 597 ntBASIC4.32□□□□□ -1.72
ABCA3Q99758 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.32□□□□□ -1.72
ABCA3Q99758 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.32□□□□□ -1.72
ABCA3Q99758 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
ABCA3Q99758 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ABCA3Q99758 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
ABCA3Q99758 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.31□□□□□ -1.72
ABCA3Q99758 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ABCA3Q99758 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
ABCA3Q99758 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.31□□□□□ -1.72
ABCA3Q99758 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
ABCA3Q99758 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms