Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MIR6503-201ENST00000622884 86 ntBASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 AC006600.2-201ENST00000624834 2506 ntBASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SCUBE3Q8IX30 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 OR56A5-201ENST00000340110 738 ntBASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 RNA5SP188-201ENST00000362916 129 ntBASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 SNORA51.6-201ENST00000384151 125 ntBASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 Y_RNA.473-201ENST00000384333 102 ntBASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 RNU6-1207P-201ENST00000384343 107 ntBASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 RNU6-1093P-201ENST00000391194 107 ntBASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 AL359643.1-201ENST00000404109 423 ntBASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 BX284632.2-201ENST00000421091 399 ntBASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 CBX1P4-201ENST00000439415 457 ntBASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 COL11A2P1-205ENST00000441798 676 ntBASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 AL359955.2-201ENST00000445380 353 ntBASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 AC015524.1-201ENST00000491585 472 ntBASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 AC093870.1-201ENST00000506837 213 ntBASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 AC093664.1-201ENST00000511779 289 ntBASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 Y_RNA.673-201ENST00000516306 88 ntBASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 SNORA81.3-201ENST00000517283 198 ntBASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 TOMM20P1-201ENST00000534518 427 ntBASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 RN7SL208P-201ENST00000577964 296 ntBASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 AC006254.3-201ENST00000603353 884 ntBASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 AC245517.5-201ENST00000611529 162 ntBASIC6.9□□□□□ -1.3
SCUBE3Q8IX30 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.9□□□□□ -1.31
SCUBE3Q8IX30 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
SCUBE3Q8IX30 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SCUBE3Q8IX30 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SCUBE3Q8IX30 MTCO1P24-201ENST00000515438 1558 ntBASIC6.9□□□□□ -1.31
SCUBE3Q8IX30 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
SCUBE3Q8IX30 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
SCUBE3Q8IX30 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.9□□□□□ -1.31
SCUBE3Q8IX30 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SCUBE3Q8IX30 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.9□□□□□ -1.31
SCUBE3Q8IX30 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC6.9□□□□□ -1.31
SCUBE3Q8IX30 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SCUBE3Q8IX30 AC011460.1-201ENST00000636268 1834 ntBASIC6.9□□□□□ -1.31
SCUBE3Q8IX30 AC093775.1-201ENST00000624154 1868 ntBASIC6.9□□□□□ -1.31
SCUBE3Q8IX30 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SCUBE3Q8IX30 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
SCUBE3Q8IX30 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SCUBE3Q8IX30 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
SCUBE3Q8IX30 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SCUBE3Q8IX30 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SCUBE3Q8IX30 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SCUBE3Q8IX30 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.89□□□□□ -1.31
SCUBE3Q8IX30 AC062029.1-202ENST00000606164 3651 ntBASIC6.89□□□□□ -1.31
SCUBE3Q8IX30 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.89□□□□□ -1.31
SCUBE3Q8IX30 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.89□□□□□ -1.31
SCUBE3Q8IX30 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SCUBE3Q8IX30 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
SCUBE3Q8IX30 AC022031.1-201ENST00000585985 2593 ntBASIC6.89□□□□□ -1.31
SCUBE3Q8IX30 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SCUBE3Q8IX30 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.89□□□□□ -1.31
SCUBE3Q8IX30 RNU1-65P-201ENST00000363919 148 ntBASIC6.89□□□□□ -1.31
SCUBE3Q8IX30 RNA5SP435-201ENST00000364044 108 ntBASIC6.89□□□□□ -1.31
SCUBE3Q8IX30 RNA5SP85-201ENST00000365378 119 ntBASIC6.89□□□□□ -1.31
SCUBE3Q8IX30 Y_RNA.376-201ENST00000365638 108 ntBASIC6.89□□□□□ -1.31
SCUBE3Q8IX30 MRPS6P2-201ENST00000381143 370 ntBASIC6.89□□□□□ -1.31
SCUBE3Q8IX30 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SCUBE3Q8IX30 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
SCUBE3Q8IX30 U3.25-201ENST00000391209 220 ntBASIC6.89□□□□□ -1.31
SCUBE3Q8IX30 RPS21P8-201ENST00000413365 247 ntBASIC6.89□□□□□ -1.31
SCUBE3Q8IX30 AC096775.1-201ENST00000437724 448 ntBASIC6.89□□□□□ -1.31
SCUBE3Q8IX30 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC6.89□□□□□ -1.31
SCUBE3Q8IX30 GAPDHP37-201ENST00000442317 968 ntBASIC6.89□□□□□ -1.31
SCUBE3Q8IX30 AL031584.1-201ENST00000447169 754 ntBASIC6.89□□□□□ -1.31
SCUBE3Q8IX30 AL353752.1-201ENST00000454946 260 ntBASIC6.89□□□□□ -1.31
SCUBE3Q8IX30 RPS3AP41-201ENST00000462701 778 ntBASIC6.89□□□□□ -1.31
SCUBE3Q8IX30 RPS23P3-201ENST00000470993 430 ntBASIC6.89□□□□□ -1.31
SCUBE3Q8IX30 FO393415.2-201ENST00000480085 343 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms