Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AL031985.3-201ENST00000565390 2449 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 AL138820.1-201ENST00000617901 5305 ntBASIC4.81□□□□□ -1.64
RNF220Q5VTB9 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
RNF220Q5VTB9 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RNF220Q5VTB9 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
RNF220Q5VTB9 MTND4P26-201ENST00000415971 1359 ntBASIC4.8□□□□□ -1.64
RNF220Q5VTB9 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
RNF220Q5VTB9 AL022322.2-201ENST00000624072 20397 ntBASIC4.8□□□□□ -1.64
RNF220Q5VTB9 SCN1A-220ENST00000641603 12506 ntBASIC4.8□□□□□ -1.64
RNF220Q5VTB9 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF220Q5VTB9 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RNF220Q5VTB9 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF220Q5VTB9 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF220Q5VTB9 AL672167.1-206ENST00000356293 943 ntBASIC4.8□□□□□ -1.64
RNF220Q5VTB9 SNORD82-201ENST00000365530 70 ntBASIC4.8□□□□□ -1.64
RNF220Q5VTB9 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.8□□□□□ -1.64
RNF220Q5VTB9 MIR195-201ENST00000385194 87 ntBASIC4.8□□□□□ -1.64
RNF220Q5VTB9 AL031679.1-201ENST00000400616 525 ntBASIC4.8□□□□□ -1.64
RNF220Q5VTB9 AL035079.1-201ENST00000405210 287 ntBASIC4.8□□□□□ -1.64
RNF220Q5VTB9 AL160275.2-201ENST00000412010 394 ntBASIC4.8□□□□□ -1.64
RNF220Q5VTB9 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF220Q5VTB9 AC016907.1-201ENST00000419483 435 ntBASIC4.8□□□□□ -1.64
RNF220Q5VTB9 OFD1P18Y-201ENST00000420889 959 ntBASIC4.8□□□□□ -1.64
RNF220Q5VTB9 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RNF220Q5VTB9 CKS1BP6-201ENST00000424932 240 ntBASIC4.8□□□□□ -1.64
RNF220Q5VTB9 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF220Q5VTB9 CYCSP6-201ENST00000434498 302 ntBASIC4.8□□□□□ -1.64
RNF220Q5VTB9 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.8□□□□□ -1.64
RNF220Q5VTB9 AL117351.1-201ENST00000438864 766 ntBASIC4.8□□□□□ -1.64
RNF220Q5VTB9 AL512286.1-201ENST00000439244 400 ntBASIC4.8□□□□□ -1.64
RNF220Q5VTB9 AL831737.1-201ENST00000441288 271 ntBASIC4.8□□□□□ -1.64
RNF220Q5VTB9 HSPE1P28-201ENST00000443139 211 ntBASIC4.8□□□□□ -1.64
RNF220Q5VTB9 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF220Q5VTB9 VN1R32P-201ENST00000452234 905 ntBASIC4.8□□□□□ -1.64
RNF220Q5VTB9 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF220Q5VTB9 RPL30P9-201ENST00000465586 330 ntBASIC4.8□□□□□ -1.64
RNF220Q5VTB9 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF220Q5VTB9 AL024509.2-201ENST00000493462 493 ntBASIC4.8□□□□□ -1.64
RNF220Q5VTB9 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF220Q5VTB9 AC006499.5-201ENST00000505037 514 ntBASIC4.8□□□□□ -1.64
RNF220Q5VTB9 AC097173.1-201ENST00000505862 819 ntBASIC4.8□□□□□ -1.64
RNF220Q5VTB9 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF220Q5VTB9 AC109458.1-201ENST00000508858 316 ntBASIC4.8□□□□□ -1.64
RNF220Q5VTB9 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF220Q5VTB9 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF220Q5VTB9 AC005798.1-201ENST00000513715 387 ntBASIC4.8□□□□□ -1.64
RNF220Q5VTB9 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF220Q5VTB9 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF220Q5VTB9 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF220Q5VTB9 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF220Q5VTB9 PCMTD1P2-201ENST00000565017 355 ntBASIC4.8□□□□□ -1.64
RNF220Q5VTB9 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF220Q5VTB9 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF220Q5VTB9 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF220Q5VTB9 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF220Q5VTB9 AP001004.1-201ENST00000582468 324 ntBASIC4.8□□□□□ -1.64
RNF220Q5VTB9 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF220Q5VTB9 AC107214.2-201ENST00000608204 634 ntBASIC4.8□□□□□ -1.64
RNF220Q5VTB9 AC090116.1-201ENST00000615679 446 ntBASIC4.8□□□□□ -1.64
RNF220Q5VTB9 AC009237.17-201ENST00000618111 748 ntBASIC4.8□□□□□ -1.64
RNF220Q5VTB9 MIR6861-201ENST00000618657 64 ntBASIC4.8□□□□□ -1.64
RNF220Q5VTB9 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF220Q5VTB9 ZNF734P-201ENST00000419494 1534 ntBASIC4.8□□□□□ -1.64
RNF220Q5VTB9 KARSP3-201ENST00000571212 1504 ntBASIC4.8□□□□□ -1.64
RNF220Q5VTB9 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF220Q5VTB9 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF220Q5VTB9 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF220Q5VTB9 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RNF220Q5VTB9 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.8□□□□□ -1.64
RNF220Q5VTB9 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF220Q5VTB9 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 PABPC1P7-201ENST00000413177 1513 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 U3.3-201ENST00000362986 216 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 RN7SKP15-201ENST00000364742 309 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 RNA5SP90-201ENST00000364801 99 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNF220Q5VTB9 RNU6-730P-201ENST00000383954 104 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 RNU6-878P-201ENST00000384578 110 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 MIR143-201ENST00000385300 106 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 RNU1-77P-201ENST00000390868 162 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 RNU6-952P-201ENST00000391164 108 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 RPL31P1-201ENST00000398116 372 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AC009804.1-201ENST00000400949 179 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 HDGFP1-201ENST00000405943 252 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 AL512422.1-201ENST00000407033 553 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 MIR1250-201ENST00000408098 113 ntBASIC4.79□□□□□ -1.64
RNF220Q5VTB9 MIR320C1-201ENST00000408566 88 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms