Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC6.82□□□□□ -1.32
CTC1Q2NKJ3 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 RNA5SP110-201ENST00000362638 115 ntBASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 RNA5SP477-201ENST00000362639 119 ntBASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 PPIAP9-201ENST00000403866 498 ntBASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 VDAC1P9-201ENST00000412766 841 ntBASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 ACTR3BP6-201ENST00000422332 1241 ntBASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 RPL21P110-201ENST00000433345 446 ntBASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 GAPDHP48-201ENST00000436626 961 ntBASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 DDX3P2-201ENST00000446138 111 ntBASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 TRGVB-201ENST00000453257 471 ntBASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 RN7SL284P-201ENST00000498823 275 ntBASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 RNU7-51P-201ENST00000516560 62 ntBASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 MIR3176-201ENST00000582210 90 ntBASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 BBIP1P1-201ENST00000602999 279 ntBASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 AL031176.1-201ENST00000604554 466 ntBASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 AL354984.3-201ENST00000604803 325 ntBASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 AL021879.1-201ENST00000611756 288 ntBASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 AL445647.2-201ENST00000615170 130 ntBASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 AL049780.3-201ENST00000624612 1583 ntBASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 AL591848.4-201ENST00000567832 3472 ntBASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.81□□□□□ -1.32
CTC1Q2NKJ3 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 AL731556.1-201ENST00000394628 3711 ntBASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 RNU4-1-201ENST00000363925 141 ntBASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 RNY1P12-201ENST00000364251 105 ntBASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 U3.12-201ENST00000364498 214 ntBASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 Y_RNA.464-201ENST00000384282 110 ntBASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 Y_RNA.562-201ENST00000384695 113 ntBASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 PCNPP3-201ENST00000393579 471 ntBASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 AC119618.1-201ENST00000434191 222 ntBASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 RSU1P2-202ENST00000437884 485 ntBASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 SNRPEP7-201ENST00000438350 220 ntBASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 AC105402.2-201ENST00000438503 358 ntBASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 AC011816.1-201ENST00000441346 546 ntBASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 RPL7P59-201ENST00000447700 943 ntBASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 PRPF38AP1-201ENST00000451976 933 ntBASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 RN7SL643P-201ENST00000471845 291 ntBASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 TRBV8-2-201ENST00000475637 270 ntBASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 AC098583.1-201ENST00000480875 255 ntBASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 RNU6-1038P-201ENST00000516516 104 ntBASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 AC123904.2-201ENST00000548059 300 ntBASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 SETP7-201ENST00000552169 453 ntBASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 AC104763.2-201ENST00000604179 382 ntBASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 AC145207.9-201ENST00000623802 325 ntBASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CTC1Q2NKJ3 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms