Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 OR6K5P-201ENST00000447050 945 ntBASIC5.26□□□□□ -1.57
COL15A1P39059 AC005002.1-201ENST00000447458 540 ntBASIC5.26□□□□□ -1.57
COL15A1P39059 AC112492.1-201ENST00000449607 712 ntBASIC5.26□□□□□ -1.57
COL15A1P39059 NPM1P13-201ENST00000452663 865 ntBASIC5.26□□□□□ -1.57
COL15A1P39059 AC002553.2-201ENST00000453217 340 ntBASIC5.26□□□□□ -1.57
COL15A1P39059 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.26□□□□□ -1.57
COL15A1P39059 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC5.26□□□□□ -1.57
COL15A1P39059 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.26□□□□□ -1.57
COL15A1P39059 SNORA3.4-201ENST00000515969 96 ntBASIC5.26□□□□□ -1.57
COL15A1P39059 snoZ278.1-201ENST00000517059 112 ntBASIC5.26□□□□□ -1.57
COL15A1P39059 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.26□□□□□ -1.57
COL15A1P39059 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.26□□□□□ -1.57
COL15A1P39059 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.26□□□□□ -1.57
COL15A1P39059 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.26□□□□□ -1.57
COL15A1P39059 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.26□□□□□ -1.57
COL15A1P39059 AC023050.2-201ENST00000544968 387 ntBASIC5.26□□□□□ -1.57
COL15A1P39059 POLR2KP1-201ENST00000553226 168 ntBASIC5.26□□□□□ -1.57
COL15A1P39059 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.26□□□□□ -1.57
COL15A1P39059 AC022884.3-201ENST00000579571 248 ntBASIC5.26□□□□□ -1.57
COL15A1P39059 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.26□□□□□ -1.57
COL15A1P39059 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.26□□□□□ -1.57
COL15A1P39059 AC021749.1-201ENST00000604322 607 ntBASIC5.26□□□□□ -1.57
COL15A1P39059 AL583856.2-201ENST00000606298 543 ntBASIC5.26□□□□□ -1.57
COL15A1P39059 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.26□□□□□ -1.57
COL15A1P39059 AL138721.1-201ENST00000616756 179 ntBASIC5.26□□□□□ -1.57
COL15A1P39059 AC243756.2-201ENST00000618406 463 ntBASIC5.26□□□□□ -1.57
COL15A1P39059 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.26□□□□□ -1.57
COL15A1P39059 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL15A1P39059 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.26□□□□□ -1.57
COL15A1P39059 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
COL15A1P39059 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.25□□□□□ -1.57
COL15A1P39059 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
COL15A1P39059 AP001273.1-201ENST00000624493 3152 ntBASIC5.25□□□□□ -1.57
COL15A1P39059 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
COL15A1P39059 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL15A1P39059 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
COL15A1P39059 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL15A1P39059 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL15A1P39059 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL15A1P39059 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL15A1P39059 SNORA63.1-201ENST00000362493 131 ntBASIC5.25□□□□□ -1.57
COL15A1P39059 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL15A1P39059 AC092745.2-202ENST00000411880 369 ntBASIC5.25□□□□□ -1.57
COL15A1P39059 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.25□□□□□ -1.57
COL15A1P39059 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.25□□□□□ -1.57
COL15A1P39059 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC5.25□□□□□ -1.57
COL15A1P39059 RAC1P8-201ENST00000427086 527 ntBASIC5.25□□□□□ -1.57
COL15A1P39059 TBCAP1-201ENST00000436520 327 ntBASIC5.25□□□□□ -1.57
COL15A1P39059 AC006011.1-201ENST00000442758 349 ntBASIC5.25□□□□□ -1.57
COL15A1P39059 RPS4XP4-201ENST00000443195 763 ntBASIC5.25□□□□□ -1.57
COL15A1P39059 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.25□□□□□ -1.57
COL15A1P39059 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
COL15A1P39059 RPL23AP44-201ENST00000482216 473 ntBASIC5.25□□□□□ -1.57
COL15A1P39059 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.25□□□□□ -1.57
COL15A1P39059 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.25□□□□□ -1.57
COL15A1P39059 AC118465.1-201ENST00000513820 1271 ntBASIC5.25□□□□□ -1.57
COL15A1P39059 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.25□□□□□ -1.57
COL15A1P39059 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.25□□□□□ -1.57
COL15A1P39059 MTCO3P15-201ENST00000526563 574 ntBASIC5.25□□□□□ -1.57
COL15A1P39059 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL15A1P39059 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.25□□□□□ -1.57
COL15A1P39059 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.25□□□□□ -1.57
COL15A1P39059 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.25□□□□□ -1.57
COL15A1P39059 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.25□□□□□ -1.57
COL15A1P39059 MIR5684-201ENST00000585074 65 ntBASIC5.25□□□□□ -1.57
COL15A1P39059 AL592436.1-201ENST00000605135 558 ntBASIC5.25□□□□□ -1.57
COL15A1P39059 AC016877.3-201ENST00000606778 504 ntBASIC5.25□□□□□ -1.57
COL15A1P39059 AC024257.5-201ENST00000612739 531 ntBASIC5.25□□□□□ -1.57
COL15A1P39059 AL121890.2-201ENST00000617644 465 ntBASIC5.25□□□□□ -1.57
COL15A1P39059 AC078883.4-201ENST00000623218 367 ntBASIC5.25□□□□□ -1.57
COL15A1P39059 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.25□□□□□ -1.57
COL15A1P39059 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.25□□□□□ -1.57
COL15A1P39059 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
COL15A1P39059 U6.107-201ENST00000637108 79 ntBASIC5.25□□□□□ -1.57
COL15A1P39059 LINC02211-204ENST00000642024 1070 ntBASIC5.25□□□□□ -1.57
COL15A1P39059 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.25□□□□□ -1.57
COL15A1P39059 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.25□□□□□ -1.57
COL15A1P39059 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.25□□□□□ -1.57
COL15A1P39059 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL15A1P39059 AC093591.2-201ENST00000565254 3843 ntBASIC5.25□□□□□ -1.57
COL15A1P39059 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL15A1P39059 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.24□□□□□ -1.57
COL15A1P39059 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL15A1P39059 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
COL15A1P39059 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL15A1P39059 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL15A1P39059 CASC19-284ENST00000642142 1868 ntBASIC5.24□□□□□ -1.57
COL15A1P39059 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.24□□□□□ -1.57
COL15A1P39059 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL15A1P39059 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL15A1P39059 AL356320.2-201ENST00000417263 507 ntBASIC5.24□□□□□ -1.57
COL15A1P39059 Z75741.2-201ENST00000417272 1167 ntBASIC5.24□□□□□ -1.57
COL15A1P39059 OR5BE1P-201ENST00000425977 939 ntBASIC5.24□□□□□ -1.57
COL15A1P39059 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.24□□□□□ -1.57
COL15A1P39059 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.24□□□□□ -1.57
COL15A1P39059 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.24□□□□□ -1.57
COL15A1P39059 NOTCH2P1-201ENST00000443481 624 ntBASIC5.24□□□□□ -1.57
COL15A1P39059 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.24□□□□□ -1.57
COL15A1P39059 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.24□□□□□ -1.57
COL15A1P39059 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms