Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 FAM206BP-201ENST00000510179 541 ntBASIC5.93□□□□□ -1.46
PDGFAP04085 NARSP2-201ENST00000518524 679 ntBASIC5.93□□□□□ -1.46
PDGFAP04085 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.93□□□□□ -1.46
PDGFAP04085 RPL7P20-201ENST00000520308 745 ntBASIC5.93□□□□□ -1.46
PDGFAP04085 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC5.93□□□□□ -1.46
PDGFAP04085 WBP1LP3-201ENST00000523033 208 ntBASIC5.93□□□□□ -1.46
PDGFAP04085 MRPS16P1-201ENST00000523462 412 ntBASIC5.93□□□□□ -1.46
PDGFAP04085 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.93□□□□□ -1.46
PDGFAP04085 AC092470.1-201ENST00000546187 132 ntBASIC5.93□□□□□ -1.46
PDGFAP04085 AC128657.1-201ENST00000549459 145 ntBASIC5.93□□□□□ -1.46
PDGFAP04085 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.93□□□□□ -1.46
PDGFAP04085 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.93□□□□□ -1.46
PDGFAP04085 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC5.93□□□□□ -1.46
PDGFAP04085 AL360012.1-201ENST00000602813 131 ntBASIC5.93□□□□□ -1.46
PDGFAP04085 AP001330.4-201ENST00000604350 154 ntBASIC5.93□□□□□ -1.46
PDGFAP04085 AC103710.3-201ENST00000608157 948 ntBASIC5.93□□□□□ -1.46
PDGFAP04085 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.93□□□□□ -1.46
PDGFAP04085 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.93□□□□□ -1.46
PDGFAP04085 AC008121.3-201ENST00000618726 433 ntBASIC5.93□□□□□ -1.46
PDGFAP04085 AC069234.4-201ENST00000621276 412 ntBASIC5.93□□□□□ -1.46
PDGFAP04085 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.93□□□□□ -1.46
PDGFAP04085 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.93□□□□□ -1.46
PDGFAP04085 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDGFAP04085 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDGFAP04085 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC5.93□□□□□ -1.46
PDGFAP04085 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
PDGFAP04085 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDGFAP04085 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
PDGFAP04085 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.93□□□□□ -1.46
PDGFAP04085 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDGFAP04085 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.92□□□□□ -1.46
PDGFAP04085 SFTPD-AS1-201ENST00000608229 5001 ntBASIC5.92□□□□□ -1.46
PDGFAP04085 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDGFAP04085 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
PDGFAP04085 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.92□□□□□ -1.46
PDGFAP04085 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
PDGFAP04085 RNU4-2-201ENST00000365668 141 ntBASIC5.92□□□□□ -1.46
PDGFAP04085 RNU6-1013P-201ENST00000384180 107 ntBASIC5.92□□□□□ -1.46
PDGFAP04085 MIR130B-202ENST00000385018 82 ntBASIC5.92□□□□□ -1.46
PDGFAP04085 AL583835.1-201ENST00000399570 407 ntBASIC5.92□□□□□ -1.46
PDGFAP04085 RPL12P12-201ENST00000424633 501 ntBASIC5.92□□□□□ -1.46
PDGFAP04085 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC5.92□□□□□ -1.46
PDGFAP04085 TRAPPC2P3-201ENST00000443200 321 ntBASIC5.92□□□□□ -1.46
PDGFAP04085 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.92□□□□□ -1.46
PDGFAP04085 PPIAP27-201ENST00000453800 265 ntBASIC5.92□□□□□ -1.46
PDGFAP04085 RPS29P15-201ENST00000458329 171 ntBASIC5.92□□□□□ -1.46
PDGFAP04085 RPL7L1P8-201ENST00000469911 741 ntBASIC5.92□□□□□ -1.46
PDGFAP04085 MTND4P17-201ENST00000470444 350 ntBASIC5.92□□□□□ -1.46
PDGFAP04085 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC5.92□□□□□ -1.46
PDGFAP04085 RNU6-559P-201ENST00000516151 98 ntBASIC5.92□□□□□ -1.46
PDGFAP04085 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.92□□□□□ -1.46
PDGFAP04085 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC5.92□□□□□ -1.46
PDGFAP04085 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.92□□□□□ -1.46
PDGFAP04085 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.92□□□□□ -1.46
PDGFAP04085 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.92□□□□□ -1.46
PDGFAP04085 FRG2DP-202ENST00000566967 323 ntBASIC5.92□□□□□ -1.46
PDGFAP04085 AC106785.4-201ENST00000569492 412 ntBASIC5.92□□□□□ -1.46
PDGFAP04085 AC004232.1-201ENST00000571388 208 ntBASIC5.92□□□□□ -1.46
PDGFAP04085 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.92□□□□□ -1.46
PDGFAP04085 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.92□□□□□ -1.46
PDGFAP04085 AC103710.2-201ENST00000609912 942 ntBASIC5.92□□□□□ -1.46
PDGFAP04085 AL354718.1-201ENST00000619764 589 ntBASIC5.92□□□□□ -1.46
PDGFAP04085 AC099494.2-201ENST00000623371 978 ntBASIC5.92□□□□□ -1.46
PDGFAP04085 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.92□□□□□ -1.46
PDGFAP04085 DOCK11P1-201ENST00000553480 5932 ntBASIC5.92□□□□□ -1.46
PDGFAP04085 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.92□□□□□ -1.46
PDGFAP04085 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.92□□□□□ -1.46
PDGFAP04085 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
PDGFAP04085 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDGFAP04085 AC235565.1-201ENST00000456962 1325 ntBASIC5.92□□□□□ -1.46
PDGFAP04085 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDGFAP04085 AC091046.3-201ENST00000631455 1574 ntBASIC5.92□□□□□ -1.46
PDGFAP04085 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PDGFAP04085 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.92□□□□□ -1.46
PDGFAP04085 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.92□□□□□ -1.46
PDGFAP04085 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PDGFAP04085 AC002525.1-201ENST00000624392 1622 ntBASIC5.92□□□□□ -1.46
PDGFAP04085 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
PDGFAP04085 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.91□□□□□ -1.46
PDGFAP04085 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFAP04085 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.91□□□□□ -1.46
PDGFAP04085 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFAP04085 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFAP04085 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFAP04085 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFAP04085 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFAP04085 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFAP04085 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.91□□□□□ -1.46
PDGFAP04085 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFAP04085 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC5.91□□□□□ -1.46
PDGFAP04085 RNU6-552P-201ENST00000362869 119 ntBASIC5.91□□□□□ -1.46
PDGFAP04085 Y_RNA.202-201ENST00000364083 110 ntBASIC5.91□□□□□ -1.46
PDGFAP04085 SNORD42.2-201ENST00000365570 69 ntBASIC5.91□□□□□ -1.46
PDGFAP04085 Y_RNA.373-201ENST00000365600 103 ntBASIC5.91□□□□□ -1.46
PDGFAP04085 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFAP04085 RNU6-641P-201ENST00000384006 107 ntBASIC5.91□□□□□ -1.46
PDGFAP04085 RNU6-38P-201ENST00000384085 107 ntBASIC5.91□□□□□ -1.46
PDGFAP04085 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
PDGFAP04085 MIR541-201ENST00000401360 84 ntBASIC5.91□□□□□ -1.46
PDGFAP04085 RNU2-29P-201ENST00000410423 189 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms