Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
HLA-DRB4X5D2U9 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC14.53□□□□□ -0.08
HLA-DRB4X5D2U9 CD99P1-205ENST00000527459 561 ntBASIC14.53□□□□□ -0.08
HLA-DRB4X5D2U9 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DRB4X5D2U9 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DRB4X5D2U9 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DRB4X5D2U9 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HLA-DRB4X5D2U9 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
HLA-DRB4X5D2U9 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
HLA-DRB4X5D2U9 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DRB4X5D2U9 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DRB4X5D2U9 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC14.52□□□□□ -0.08
HLA-DRB4X5D2U9 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
HLA-DRB4X5D2U9 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DRB4X5D2U9 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DRB4X5D2U9 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DRB4X5D2U9 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC14.52□□□□□ -0.08
HLA-DRB4X5D2U9 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DRB4X5D2U9 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DRB4X5D2U9 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
HLA-DRB4X5D2U9 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DRB4X5D2U9 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
HLA-DRB4X5D2U9 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
HLA-DRB4X5D2U9 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
HLA-DRB4X5D2U9 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
HLA-DRB4X5D2U9 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
HLA-DRB4X5D2U9 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DRB4X5D2U9 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DRB4X5D2U9 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC14.52□□□□□ -0.09
HLA-DRB4X5D2U9 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DRB4X5D2U9 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DRB4X5D2U9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DRB4X5D2U9 MMAB-206ENST00000540016 945 ntTSL 3 BASIC14.52□□□□□ -0.09
HLA-DRB4X5D2U9 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC14.52□□□□□ -0.09
HLA-DRB4X5D2U9 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC14.52□□□□□ -0.09
HLA-DRB4X5D2U9 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DRB4X5D2U9 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC14.52□□□□□ -0.09
HLA-DRB4X5D2U9 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC14.52□□□□□ -0.09
HLA-DRB4X5D2U9 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DRB4X5D2U9 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DRB4X5D2U9 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC14.52□□□□□ -0.09
HLA-DRB4X5D2U9 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DRB4X5D2U9 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC14.52□□□□□ -0.09
HLA-DRB4X5D2U9 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC14.52□□□□□ -0.09
HLA-DRB4X5D2U9 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC14.52□□□□□ -0.09
HLA-DRB4X5D2U9 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DRB4X5D2U9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC14.52□□□□□ -0.09
HLA-DRB4X5D2U9 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DRB4X5D2U9 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DRB4X5D2U9 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DRB4X5D2U9 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DRB4X5D2U9 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
HLA-DRB4X5D2U9 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
HLA-DRB4X5D2U9 AL158211.5-201ENST00000623583 2518 ntBASIC14.51□□□□□ -0.09
HLA-DRB4X5D2U9 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DRB4X5D2U9 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DRB4X5D2U9 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DRB4X5D2U9 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DRB4X5D2U9 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
HLA-DRB4X5D2U9 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
HLA-DRB4X5D2U9 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HLA-DRB4X5D2U9 ESRRAP1-201ENST00000400596 1257 ntBASIC14.51□□□□□ -0.09
HLA-DRB4X5D2U9 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC14.51□□□□□ -0.09
HLA-DRB4X5D2U9 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DRB4X5D2U9 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DRB4X5D2U9 THEM4-205ENST00000489410 643 ntTSL 2 BASIC14.51□□□□□ -0.09
HLA-DRB4X5D2U9 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC14.51□□□□□ -0.09
HLA-DRB4X5D2U9 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DRB4X5D2U9 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DRB4X5D2U9 AC069544.1-201ENST00000609399 999 ntBASIC14.51□□□□□ -0.09
HLA-DRB4X5D2U9 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DRB4X5D2U9 GOLGA6L3-201ENST00000507199 1679 ntBASIC14.51□□□□□ -0.09
HLA-DRB4X5D2U9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DRB4X5D2U9 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DRB4X5D2U9 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DRB4X5D2U9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DRB4X5D2U9 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DRB4X5D2U9 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
HLA-DRB4X5D2U9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms