Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
PCDHGA4Q9Y5G9 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PCDHGA4Q9Y5G9 AL445228.2-201ENST00000605589 952 ntBASIC19.03■□□□□ 0.64
PCDHGA4Q9Y5G9 CD177P1-201ENST00000606252 935 ntBASIC19.03■□□□□ 0.64
PCDHGA4Q9Y5G9 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC19.03■□□□□ 0.64
PCDHGA4Q9Y5G9 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA4Q9Y5G9 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHGA4Q9Y5G9 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA4Q9Y5G9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PCDHGA4Q9Y5G9 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA4Q9Y5G9 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA4Q9Y5G9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA4Q9Y5G9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA4Q9Y5G9 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHGA4Q9Y5G9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PCDHGA4Q9Y5G9 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA4Q9Y5G9 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
PCDHGA4Q9Y5G9 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHGA4Q9Y5G9 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA4Q9Y5G9 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA4Q9Y5G9 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHGA4Q9Y5G9 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
PCDHGA4Q9Y5G9 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA4Q9Y5G9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA4Q9Y5G9 AL691432.2-201ENST00000607222 2038 ntBASIC19.02■□□□□ 0.64
PCDHGA4Q9Y5G9 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA4Q9Y5G9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA4Q9Y5G9 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDHGA4Q9Y5G9 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA4Q9Y5G9 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA4Q9Y5G9 TMPOP1-202ENST00000424642 1267 ntBASIC19.02■□□□□ 0.64
PCDHGA4Q9Y5G9 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHGA4Q9Y5G9 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
PCDHGA4Q9Y5G9 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
PCDHGA4Q9Y5G9 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA4Q9Y5G9 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDHGA4Q9Y5G9 AC026471.5-201ENST00000615068 467 ntBASIC19.02■□□□□ 0.64
PCDHGA4Q9Y5G9 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHGA4Q9Y5G9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA4Q9Y5G9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHGA4Q9Y5G9 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
PCDHGA4Q9Y5G9 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHGA4Q9Y5G9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHGA4Q9Y5G9 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHGA4Q9Y5G9 TCF3P1-201ENST00000423021 1937 ntBASIC19.02■□□□□ 0.63
PCDHGA4Q9Y5G9 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHGA4Q9Y5G9 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.02■□□□□ 0.63
PCDHGA4Q9Y5G9 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
PCDHGA4Q9Y5G9 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA4Q9Y5G9 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA4Q9Y5G9 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA4Q9Y5G9 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
PCDHGA4Q9Y5G9 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHGA4Q9Y5G9 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
PCDHGA4Q9Y5G9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
PCDHGA4Q9Y5G9 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PCDHGA4Q9Y5G9 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
PCDHGA4Q9Y5G9 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
PCDHGA4Q9Y5G9 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA4Q9Y5G9 AC106820.2-201ENST00000563775 3264 ntBASIC19.01■□□□□ 0.63
PCDHGA4Q9Y5G9 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA4Q9Y5G9 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.01■□□□□ 0.63
PCDHGA4Q9Y5G9 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
PCDHGA4Q9Y5G9 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA4Q9Y5G9 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA4Q9Y5G9 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHGA4Q9Y5G9 AL353708.3-201ENST00000610272 989 ntBASIC19.01■□□□□ 0.63
PCDHGA4Q9Y5G9 AC006213.4-201ENST00000616184 634 ntBASIC19.01■□□□□ 0.63
PCDHGA4Q9Y5G9 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.01■□□□□ 0.63
PCDHGA4Q9Y5G9 AC124283.5-201ENST00000624661 1809 ntBASIC19.01■□□□□ 0.63
PCDHGA4Q9Y5G9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA4Q9Y5G9 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA4Q9Y5G9 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA4Q9Y5G9 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
PCDHGA4Q9Y5G9 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA4Q9Y5G9 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA4Q9Y5G9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA4Q9Y5G9 AC112907.3-201ENST00000577781 2400 ntBASIC19.01■□□□□ 0.63
PCDHGA4Q9Y5G9 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.01■□□□□ 0.63
PCDHGA4Q9Y5G9 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PCDHGA4Q9Y5G9 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
PCDHGA4Q9Y5G9 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHGA4Q9Y5G9 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHGA4Q9Y5G9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA4Q9Y5G9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA4Q9Y5G9 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PCDHGA4Q9Y5G9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
PCDHGA4Q9Y5G9 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA4Q9Y5G9 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PCDHGA4Q9Y5G9 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA4Q9Y5G9 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA4Q9Y5G9 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA4Q9Y5G9 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19■□□□□ 0.63
PCDHGA4Q9Y5G9 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA4Q9Y5G9 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA4Q9Y5G9 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGA4Q9Y5G9 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
PCDHGA4Q9Y5G9 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19■□□□□ 0.63
PCDHGA4Q9Y5G9 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PCDHGA4Q9Y5G9 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms