Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.74■□□□□ 0.91
SSX2IPQ9Y2D8 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.74■□□□□ 0.91
SSX2IPQ9Y2D8 AP001271.2-201ENST00000624018 1556 ntBASIC20.74■□□□□ 0.91
SSX2IPQ9Y2D8 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SSX2IPQ9Y2D8 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SSX2IPQ9Y2D8 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSX2IPQ9Y2D8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSX2IPQ9Y2D8 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.74■□□□□ 0.91
SSX2IPQ9Y2D8 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSX2IPQ9Y2D8 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSX2IPQ9Y2D8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSX2IPQ9Y2D8 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SSX2IPQ9Y2D8 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSX2IPQ9Y2D8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
SSX2IPQ9Y2D8 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSX2IPQ9Y2D8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.73■□□□□ 0.91
SSX2IPQ9Y2D8 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSX2IPQ9Y2D8 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSX2IPQ9Y2D8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSX2IPQ9Y2D8 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.73■□□□□ 0.91
SSX2IPQ9Y2D8 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
SSX2IPQ9Y2D8 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SSX2IPQ9Y2D8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSX2IPQ9Y2D8 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SSX2IPQ9Y2D8 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.73■□□□□ 0.91
SSX2IPQ9Y2D8 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SSX2IPQ9Y2D8 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.73■□□□□ 0.91
SSX2IPQ9Y2D8 MFAP1P1-201ENST00000442257 1255 ntBASIC20.73■□□□□ 0.91
SSX2IPQ9Y2D8 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.73■□□□□ 0.91
SSX2IPQ9Y2D8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.73■□□□□ 0.91
SSX2IPQ9Y2D8 NTF6B-201ENST00000591913 560 ntBASIC20.73■□□□□ 0.91
SSX2IPQ9Y2D8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.73■□□□□ 0.91
SSX2IPQ9Y2D8 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.73■□□□□ 0.91
SSX2IPQ9Y2D8 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SSX2IPQ9Y2D8 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSX2IPQ9Y2D8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SSX2IPQ9Y2D8 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SSX2IPQ9Y2D8 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SSX2IPQ9Y2D8 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.73■□□□□ 0.91
SSX2IPQ9Y2D8 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SSX2IPQ9Y2D8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSX2IPQ9Y2D8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SSX2IPQ9Y2D8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSX2IPQ9Y2D8 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSX2IPQ9Y2D8 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SSX2IPQ9Y2D8 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSX2IPQ9Y2D8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.72■□□□□ 0.91
SSX2IPQ9Y2D8 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSX2IPQ9Y2D8 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.72■□□□□ 0.91
SSX2IPQ9Y2D8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSX2IPQ9Y2D8 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSX2IPQ9Y2D8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.72■□□□□ 0.91
SSX2IPQ9Y2D8 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSX2IPQ9Y2D8 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.72■□□□□ 0.91
SSX2IPQ9Y2D8 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.72■□□□□ 0.91
SSX2IPQ9Y2D8 AC087388.1-201ENST00000571370 1112 ntBASIC20.72■□□□□ 0.91
SSX2IPQ9Y2D8 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.72■□□□□ 0.91
SSX2IPQ9Y2D8 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SSX2IPQ9Y2D8 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
SSX2IPQ9Y2D8 AC010653.2-201ENST00000623505 997 ntBASIC20.72■□□□□ 0.91
SSX2IPQ9Y2D8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSX2IPQ9Y2D8 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SSX2IPQ9Y2D8 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSX2IPQ9Y2D8 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSX2IPQ9Y2D8 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSX2IPQ9Y2D8 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSX2IPQ9Y2D8 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SSX2IPQ9Y2D8 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SSX2IPQ9Y2D8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSX2IPQ9Y2D8 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.71■□□□□ 0.91
SSX2IPQ9Y2D8 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSX2IPQ9Y2D8 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSX2IPQ9Y2D8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSX2IPQ9Y2D8 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSX2IPQ9Y2D8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SSX2IPQ9Y2D8 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSX2IPQ9Y2D8 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSX2IPQ9Y2D8 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.71■□□□□ 0.91
SSX2IPQ9Y2D8 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.71■□□□□ 0.91
SSX2IPQ9Y2D8 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SSX2IPQ9Y2D8 FAM87A-204ENST00000613235 858 ntBASIC20.71■□□□□ 0.91
SSX2IPQ9Y2D8 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.71■□□□□ 0.91
SSX2IPQ9Y2D8 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SSX2IPQ9Y2D8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SSX2IPQ9Y2D8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.71■□□□□ 0.91
SSX2IPQ9Y2D8 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SSX2IPQ9Y2D8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSX2IPQ9Y2D8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SSX2IPQ9Y2D8 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSX2IPQ9Y2D8 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSX2IPQ9Y2D8 BX119927.1-201ENST00000636596 1552 ntBASIC20.71■□□□□ 0.91
SSX2IPQ9Y2D8 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSX2IPQ9Y2D8 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.71■□□□□ 0.91
SSX2IPQ9Y2D8 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SSX2IPQ9Y2D8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.7■□□□□ 0.9
SSX2IPQ9Y2D8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.7■□□□□ 0.9
SSX2IPQ9Y2D8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.7■□□□□ 0.9
SSX2IPQ9Y2D8 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.7■□□□□ 0.9
SSX2IPQ9Y2D8 LINC01006-201ENST00000333319 2292 ntBASIC20.7■□□□□ 0.9
SSX2IPQ9Y2D8 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms