Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RNF6Q9Y252 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF6Q9Y252 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.15■□□□□ 0.5
RNF6Q9Y252 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF6Q9Y252 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF6Q9Y252 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF6Q9Y252 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF6Q9Y252 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF6Q9Y252 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF6Q9Y252 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RNF6Q9Y252 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
RNF6Q9Y252 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF6Q9Y252 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF6Q9Y252 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF6Q9Y252 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF6Q9Y252 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF6Q9Y252 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
RNF6Q9Y252 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF6Q9Y252 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF6Q9Y252 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
RNF6Q9Y252 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF6Q9Y252 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF6Q9Y252 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF6Q9Y252 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF6Q9Y252 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF6Q9Y252 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF6Q9Y252 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF6Q9Y252 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF6Q9Y252 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF6Q9Y252 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF6Q9Y252 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RNF6Q9Y252 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF6Q9Y252 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
RNF6Q9Y252 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF6Q9Y252 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF6Q9Y252 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF6Q9Y252 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF6Q9Y252 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF6Q9Y252 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RNF6Q9Y252 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF6Q9Y252 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF6Q9Y252 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF6Q9Y252 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF6Q9Y252 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
RNF6Q9Y252 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF6Q9Y252 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF6Q9Y252 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
RNF6Q9Y252 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.13■□□□□ 0.49
RNF6Q9Y252 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
RNF6Q9Y252 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF6Q9Y252 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF6Q9Y252 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF6Q9Y252 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF6Q9Y252 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF6Q9Y252 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
RNF6Q9Y252 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF6Q9Y252 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF6Q9Y252 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
RNF6Q9Y252 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF6Q9Y252 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF6Q9Y252 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF6Q9Y252 LINC01465-201ENST00000408887 1940 ntBASIC18.12■□□□□ 0.49
RNF6Q9Y252 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF6Q9Y252 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF6Q9Y252 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF6Q9Y252 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF6Q9Y252 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF6Q9Y252 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF6Q9Y252 SNORA78-201ENST00000459373 127 ntBASIC18.12■□□□□ 0.49
RNF6Q9Y252 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF6Q9Y252 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF6Q9Y252 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF6Q9Y252 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF6Q9Y252 AC087633.2-202ENST00000565166 1439 ntBASIC18.12■□□□□ 0.49
RNF6Q9Y252 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF6Q9Y252 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RNF6Q9Y252 AC009237.14-201ENST00000609975 1594 ntBASIC18.12■□□□□ 0.49
RNF6Q9Y252 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.12■□□□□ 0.49
RNF6Q9Y252 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.12■□□□□ 0.49
RNF6Q9Y252 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF6Q9Y252 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF6Q9Y252 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF6Q9Y252 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
RNF6Q9Y252 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF6Q9Y252 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF6Q9Y252 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF6Q9Y252 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.11■□□□□ 0.49
RNF6Q9Y252 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF6Q9Y252 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF6Q9Y252 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF6Q9Y252 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF6Q9Y252 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF6Q9Y252 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RNF6Q9Y252 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.11■□□□□ 0.49
RNF6Q9Y252 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF6Q9Y252 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RNF6Q9Y252 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF6Q9Y252 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF6Q9Y252 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF6Q9Y252 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms