Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
COPS3Q9UNS2 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.18■□□□□ 0.34
COPS3Q9UNS2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.18■□□□□ 0.34
COPS3Q9UNS2 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
COPS3Q9UNS2 AC092437.1-201ENST00000624794 1048 ntBASIC17.18■□□□□ 0.34
COPS3Q9UNS2 AC073111.5-205ENST00000641717 521 ntBASIC17.18■□□□□ 0.34
COPS3Q9UNS2 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COPS3Q9UNS2 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.18■□□□□ 0.34
COPS3Q9UNS2 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COPS3Q9UNS2 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
COPS3Q9UNS2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
COPS3Q9UNS2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
COPS3Q9UNS2 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.18■□□□□ 0.34
COPS3Q9UNS2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COPS3Q9UNS2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COPS3Q9UNS2 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COPS3Q9UNS2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
COPS3Q9UNS2 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COPS3Q9UNS2 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COPS3Q9UNS2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COPS3Q9UNS2 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COPS3Q9UNS2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COPS3Q9UNS2 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.17■□□□□ 0.34
COPS3Q9UNS2 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.17■□□□□ 0.34
COPS3Q9UNS2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.17■□□□□ 0.34
COPS3Q9UNS2 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COPS3Q9UNS2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.17■□□□□ 0.34
COPS3Q9UNS2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
COPS3Q9UNS2 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.17■□□□□ 0.34
COPS3Q9UNS2 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.17■□□□□ 0.34
COPS3Q9UNS2 AF201337.1-201ENST00000520239 748 ntBASIC17.17■□□□□ 0.34
COPS3Q9UNS2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.17■□□□□ 0.34
COPS3Q9UNS2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COPS3Q9UNS2 AC005829.2-201ENST00000571422 1056 ntBASIC17.17■□□□□ 0.34
COPS3Q9UNS2 AC080038.1-201ENST00000611274 1154 ntBASIC17.17■□□□□ 0.34
COPS3Q9UNS2 MIR5787-201ENST00000611784 55 ntBASIC17.17■□□□□ 0.34
COPS3Q9UNS2 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
COPS3Q9UNS2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COPS3Q9UNS2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
COPS3Q9UNS2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.17■□□□□ 0.34
COPS3Q9UNS2 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COPS3Q9UNS2 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COPS3Q9UNS2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
COPS3Q9UNS2 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
COPS3Q9UNS2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.17■□□□□ 0.34
COPS3Q9UNS2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
COPS3Q9UNS2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.17■□□□□ 0.34
COPS3Q9UNS2 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COPS3Q9UNS2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COPS3Q9UNS2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
COPS3Q9UNS2 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COPS3Q9UNS2 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COPS3Q9UNS2 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.16■□□□□ 0.34
COPS3Q9UNS2 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COPS3Q9UNS2 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COPS3Q9UNS2 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.16■□□□□ 0.34
COPS3Q9UNS2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
COPS3Q9UNS2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
COPS3Q9UNS2 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.16■□□□□ 0.34
COPS3Q9UNS2 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.16■□□□□ 0.34
COPS3Q9UNS2 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COPS3Q9UNS2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COPS3Q9UNS2 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.16■□□□□ 0.34
COPS3Q9UNS2 AC073210.2-201ENST00000430369 194 ntBASIC17.16■□□□□ 0.34
COPS3Q9UNS2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.16■□□□□ 0.34
COPS3Q9UNS2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.16■□□□□ 0.34
COPS3Q9UNS2 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.16■□□□□ 0.34
COPS3Q9UNS2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.16■□□□□ 0.34
COPS3Q9UNS2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
COPS3Q9UNS2 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
COPS3Q9UNS2 SDHAP1-207ENST00000440850 2000 ntBASIC17.16■□□□□ 0.34
COPS3Q9UNS2 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COPS3Q9UNS2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COPS3Q9UNS2 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COPS3Q9UNS2 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
COPS3Q9UNS2 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
COPS3Q9UNS2 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COPS3Q9UNS2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
COPS3Q9UNS2 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.16■□□□□ 0.34
COPS3Q9UNS2 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
COPS3Q9UNS2 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
COPS3Q9UNS2 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
COPS3Q9UNS2 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
COPS3Q9UNS2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
COPS3Q9UNS2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
COPS3Q9UNS2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COPS3Q9UNS2 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.15■□□□□ 0.34
COPS3Q9UNS2 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COPS3Q9UNS2 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
COPS3Q9UNS2 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COPS3Q9UNS2 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
COPS3Q9UNS2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COPS3Q9UNS2 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
COPS3Q9UNS2 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.15■□□□□ 0.34
COPS3Q9UNS2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.15■□□□□ 0.34
COPS3Q9UNS2 AL390719.1-204ENST00000412397 1219 ntBASIC17.15■□□□□ 0.34
COPS3Q9UNS2 CDCA4P2-201ENST00000441182 718 ntBASIC17.15■□□□□ 0.34
COPS3Q9UNS2 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.15■□□□□ 0.34
COPS3Q9UNS2 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.15■□□□□ 0.34
COPS3Q9UNS2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms