Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
DNMT3BQ9UBC3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
DNMT3BQ9UBC3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DNMT3BQ9UBC3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
DNMT3BQ9UBC3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DNMT3BQ9UBC3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DNMT3BQ9UBC3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DNMT3BQ9UBC3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.15■□□□□ 0.82
DNMT3BQ9UBC3 AL441883.1-201ENST00000566170 1045 ntBASIC20.15■□□□□ 0.82
DNMT3BQ9UBC3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
DNMT3BQ9UBC3 AL023973.1-201ENST00000624619 620 ntBASIC20.15■□□□□ 0.82
DNMT3BQ9UBC3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
DNMT3BQ9UBC3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.15■□□□□ 0.82
DNMT3BQ9UBC3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DNMT3BQ9UBC3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DNMT3BQ9UBC3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DNMT3BQ9UBC3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
DNMT3BQ9UBC3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.15■□□□□ 0.82
DNMT3BQ9UBC3 AC099778.1-201ENST00000568593 1911 ntBASIC20.15■□□□□ 0.82
DNMT3BQ9UBC3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DNMT3BQ9UBC3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DNMT3BQ9UBC3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DNMT3BQ9UBC3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DNMT3BQ9UBC3 AL391422.3-201ENST00000603791 2761 ntBASIC20.15■□□□□ 0.82
DNMT3BQ9UBC3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
DNMT3BQ9UBC3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
DNMT3BQ9UBC3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
DNMT3BQ9UBC3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DNMT3BQ9UBC3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DNMT3BQ9UBC3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.14■□□□□ 0.81
DNMT3BQ9UBC3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.14■□□□□ 0.81
DNMT3BQ9UBC3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DNMT3BQ9UBC3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DNMT3BQ9UBC3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.14■□□□□ 0.81
DNMT3BQ9UBC3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DNMT3BQ9UBC3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.14■□□□□ 0.81
DNMT3BQ9UBC3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.14■□□□□ 0.81
DNMT3BQ9UBC3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DNMT3BQ9UBC3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DNMT3BQ9UBC3 AC140113.3-201ENST00000605663 199 ntBASIC20.14■□□□□ 0.81
DNMT3BQ9UBC3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
DNMT3BQ9UBC3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.14■□□□□ 0.81
DNMT3BQ9UBC3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DNMT3BQ9UBC3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.14■□□□□ 0.81
DNMT3BQ9UBC3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DNMT3BQ9UBC3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DNMT3BQ9UBC3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
DNMT3BQ9UBC3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.13■□□□□ 0.81
DNMT3BQ9UBC3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
DNMT3BQ9UBC3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
DNMT3BQ9UBC3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.13■□□□□ 0.81
DNMT3BQ9UBC3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.13■□□□□ 0.81
DNMT3BQ9UBC3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DNMT3BQ9UBC3 KRT8P11-201ENST00000409686 1436 ntBASIC20.13■□□□□ 0.81
DNMT3BQ9UBC3 KRT8P45-201ENST00000414328 1447 ntBASIC20.13■□□□□ 0.81
DNMT3BQ9UBC3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
DNMT3BQ9UBC3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.13■□□□□ 0.81
DNMT3BQ9UBC3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DNMT3BQ9UBC3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
DNMT3BQ9UBC3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DNMT3BQ9UBC3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DNMT3BQ9UBC3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.13■□□□□ 0.81
DNMT3BQ9UBC3 HOMER2P1-201ENST00000455653 964 ntBASIC20.13■□□□□ 0.81
DNMT3BQ9UBC3 FAM86EP-206ENST00000510506 987 ntBASIC20.13■□□□□ 0.81
DNMT3BQ9UBC3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.13■□□□□ 0.81
DNMT3BQ9UBC3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.13■□□□□ 0.81
DNMT3BQ9UBC3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
DNMT3BQ9UBC3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.13■□□□□ 0.81
DNMT3BQ9UBC3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
DNMT3BQ9UBC3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.13■□□□□ 0.81
DNMT3BQ9UBC3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
DNMT3BQ9UBC3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.13■□□□□ 0.81
DNMT3BQ9UBC3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DNMT3BQ9UBC3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
DNMT3BQ9UBC3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
DNMT3BQ9UBC3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DNMT3BQ9UBC3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.12■□□□□ 0.81
DNMT3BQ9UBC3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DNMT3BQ9UBC3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DNMT3BQ9UBC3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DNMT3BQ9UBC3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DNMT3BQ9UBC3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DNMT3BQ9UBC3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.12■□□□□ 0.81
DNMT3BQ9UBC3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DNMT3BQ9UBC3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.12■□□□□ 0.81
DNMT3BQ9UBC3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.12■□□□□ 0.81
DNMT3BQ9UBC3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.12■□□□□ 0.81
DNMT3BQ9UBC3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.12■□□□□ 0.81
DNMT3BQ9UBC3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.12■□□□□ 0.81
DNMT3BQ9UBC3 AP000550.4-202ENST00000639755 178 ntBASIC20.12■□□□□ 0.81
DNMT3BQ9UBC3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.12■□□□□ 0.81
DNMT3BQ9UBC3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DNMT3BQ9UBC3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
DNMT3BQ9UBC3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
DNMT3BQ9UBC3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
DNMT3BQ9UBC3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DNMT3BQ9UBC3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DNMT3BQ9UBC3 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DNMT3BQ9UBC3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.12■□□□□ 0.81
DNMT3BQ9UBC3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms