Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDLIM7Q9NR12 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PDLIM7Q9NR12 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
PDLIM7Q9NR12 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.67■■□□□ 1.06
PDLIM7Q9NR12 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.67■■□□□ 1.06
PDLIM7Q9NR12 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.66■■□□□ 1.06
PDLIM7Q9NR12 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDLIM7Q9NR12 AC005332.1-201ENST00000577698 1310 ntBASIC21.66■■□□□ 1.06
PDLIM7Q9NR12 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDLIM7Q9NR12 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDLIM7Q9NR12 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDLIM7Q9NR12 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
PDLIM7Q9NR12 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
PDLIM7Q9NR12 AC004951.3-201ENST00000418645 1148 ntBASIC21.66■■□□□ 1.06
PDLIM7Q9NR12 HOMER2P1-201ENST00000455653 964 ntBASIC21.66■■□□□ 1.06
PDLIM7Q9NR12 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.66■■□□□ 1.06
PDLIM7Q9NR12 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
PDLIM7Q9NR12 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.66■■□□□ 1.06
PDLIM7Q9NR12 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.66■■□□□ 1.06
PDLIM7Q9NR12 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDLIM7Q9NR12 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDLIM7Q9NR12 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDLIM7Q9NR12 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.66■■□□□ 1.06
PDLIM7Q9NR12 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
PDLIM7Q9NR12 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDLIM7Q9NR12 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDLIM7Q9NR12 KRT8P8-201ENST00000434750 1448 ntBASIC21.65■■□□□ 1.06
PDLIM7Q9NR12 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDLIM7Q9NR12 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PDLIM7Q9NR12 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDLIM7Q9NR12 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.65■■□□□ 1.06
PDLIM7Q9NR12 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PDLIM7Q9NR12 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.65■■□□□ 1.06
PDLIM7Q9NR12 AL359075.1-203ENST00000462729 1002 ntBASIC21.65■■□□□ 1.06
PDLIM7Q9NR12 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.65■■□□□ 1.06
PDLIM7Q9NR12 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC21.65■■□□□ 1.06
PDLIM7Q9NR12 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.65■■□□□ 1.06
PDLIM7Q9NR12 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.65■■□□□ 1.06
PDLIM7Q9NR12 AC116407.4-201ENST00000623319 1061 ntBASIC21.65■■□□□ 1.06
PDLIM7Q9NR12 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDLIM7Q9NR12 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.65■■□□□ 1.06
PDLIM7Q9NR12 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDLIM7Q9NR12 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDLIM7Q9NR12 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDLIM7Q9NR12 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDLIM7Q9NR12 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDLIM7Q9NR12 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.65■■□□□ 1.06
PDLIM7Q9NR12 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.64■■□□□ 1.06
PDLIM7Q9NR12 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.64■■□□□ 1.06
PDLIM7Q9NR12 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
PDLIM7Q9NR12 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
PDLIM7Q9NR12 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
PDLIM7Q9NR12 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.64■■□□□ 1.06
PDLIM7Q9NR12 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PDLIM7Q9NR12 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDLIM7Q9NR12 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDLIM7Q9NR12 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDLIM7Q9NR12 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDLIM7Q9NR12 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDLIM7Q9NR12 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.64■■□□□ 1.05
PDLIM7Q9NR12 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
PDLIM7Q9NR12 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
PDLIM7Q9NR12 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.64■■□□□ 1.05
PDLIM7Q9NR12 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDLIM7Q9NR12 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.64■■□□□ 1.05
PDLIM7Q9NR12 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PDLIM7Q9NR12 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDLIM7Q9NR12 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDLIM7Q9NR12 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PDLIM7Q9NR12 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.64■■□□□ 1.05
PDLIM7Q9NR12 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.64■■□□□ 1.05
PDLIM7Q9NR12 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
PDLIM7Q9NR12 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDLIM7Q9NR12 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDLIM7Q9NR12 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PDLIM7Q9NR12 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDLIM7Q9NR12 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
PDLIM7Q9NR12 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM7Q9NR12 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM7Q9NR12 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.63■■□□□ 1.05
PDLIM7Q9NR12 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.63■■□□□ 1.05
PDLIM7Q9NR12 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.63■■□□□ 1.05
PDLIM7Q9NR12 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM7Q9NR12 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM7Q9NR12 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM7Q9NR12 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM7Q9NR12 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.63■■□□□ 1.05
PDLIM7Q9NR12 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
PDLIM7Q9NR12 HLA-A-209ENST00000638375 975 ntBASIC21.63■■□□□ 1.05
PDLIM7Q9NR12 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM7Q9NR12 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM7Q9NR12 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PDLIM7Q9NR12 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM7Q9NR12 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.63■■□□□ 1.05
PDLIM7Q9NR12 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDLIM7Q9NR12 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.62■■□□□ 1.05
PDLIM7Q9NR12 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
PDLIM7Q9NR12 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDLIM7Q9NR12 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.62■■□□□ 1.05
PDLIM7Q9NR12 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms