Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.31■□□□□ 0.68
TM9SF3Q9HD45 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.31■□□□□ 0.68
TM9SF3Q9HD45 MFAP1P1-201ENST00000442257 1255 ntBASIC19.31■□□□□ 0.68
TM9SF3Q9HD45 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.31■□□□□ 0.68
TM9SF3Q9HD45 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.31■□□□□ 0.68
TM9SF3Q9HD45 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
TM9SF3Q9HD45 TMEM179-206ENST00000616017 1645 ntBASIC19.31■□□□□ 0.68
TM9SF3Q9HD45 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TM9SF3Q9HD45 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TM9SF3Q9HD45 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TM9SF3Q9HD45 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
TM9SF3Q9HD45 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
TM9SF3Q9HD45 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TM9SF3Q9HD45 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM9SF3Q9HD45 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM9SF3Q9HD45 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.3■□□□□ 0.68
TM9SF3Q9HD45 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM9SF3Q9HD45 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TM9SF3Q9HD45 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
TM9SF3Q9HD45 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
TM9SF3Q9HD45 BX664615.1-201ENST00000443558 458 ntBASIC19.3■□□□□ 0.68
TM9SF3Q9HD45 FAM207BP-201ENST00000447172 505 ntBASIC19.3■□□□□ 0.68
TM9SF3Q9HD45 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.3■□□□□ 0.68
TM9SF3Q9HD45 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM9SF3Q9HD45 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TM9SF3Q9HD45 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TM9SF3Q9HD45 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TM9SF3Q9HD45 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM9SF3Q9HD45 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.3■□□□□ 0.68
TM9SF3Q9HD45 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TM9SF3Q9HD45 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.3■□□□□ 0.68
TM9SF3Q9HD45 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TM9SF3Q9HD45 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TM9SF3Q9HD45 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TM9SF3Q9HD45 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.3■□□□□ 0.68
TM9SF3Q9HD45 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.29■□□□□ 0.68
TM9SF3Q9HD45 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
TM9SF3Q9HD45 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM9SF3Q9HD45 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
TM9SF3Q9HD45 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM9SF3Q9HD45 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TM9SF3Q9HD45 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.29■□□□□ 0.68
TM9SF3Q9HD45 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TM9SF3Q9HD45 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM9SF3Q9HD45 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM9SF3Q9HD45 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TM9SF3Q9HD45 HMGA1P5-201ENST00000412453 271 ntBASIC19.29■□□□□ 0.68
TM9SF3Q9HD45 AK4P3-201ENST00000418260 669 ntBASIC19.29■□□□□ 0.68
TM9SF3Q9HD45 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TM9SF3Q9HD45 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.29■□□□□ 0.68
TM9SF3Q9HD45 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TM9SF3Q9HD45 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.29■□□□□ 0.68
TM9SF3Q9HD45 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.29■□□□□ 0.68
TM9SF3Q9HD45 AC116562.4-202ENST00000641738 218 ntBASIC19.29■□□□□ 0.68
TM9SF3Q9HD45 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TM9SF3Q9HD45 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.29■□□□□ 0.68
TM9SF3Q9HD45 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM9SF3Q9HD45 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM9SF3Q9HD45 AC096733.2-201ENST00000609937 1394 ntBASIC19.29■□□□□ 0.68
TM9SF3Q9HD45 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.29■□□□□ 0.68
TM9SF3Q9HD45 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TM9SF3Q9HD45 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.29■□□□□ 0.68
TM9SF3Q9HD45 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM9SF3Q9HD45 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM9SF3Q9HD45 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM9SF3Q9HD45 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM9SF3Q9HD45 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM9SF3Q9HD45 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM9SF3Q9HD45 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.28■□□□□ 0.68
TM9SF3Q9HD45 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TM9SF3Q9HD45 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM9SF3Q9HD45 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM9SF3Q9HD45 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM9SF3Q9HD45 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TM9SF3Q9HD45 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.28■□□□□ 0.68
TM9SF3Q9HD45 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TM9SF3Q9HD45 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM9SF3Q9HD45 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.28■□□□□ 0.68
TM9SF3Q9HD45 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.28■□□□□ 0.68
TM9SF3Q9HD45 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM9SF3Q9HD45 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.28■□□□□ 0.68
TM9SF3Q9HD45 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
TM9SF3Q9HD45 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
TM9SF3Q9HD45 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.28■□□□□ 0.68
TM9SF3Q9HD45 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.28■□□□□ 0.68
TM9SF3Q9HD45 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
TM9SF3Q9HD45 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.28■□□□□ 0.68
TM9SF3Q9HD45 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM9SF3Q9HD45 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TM9SF3Q9HD45 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM9SF3Q9HD45 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.28■□□□□ 0.68
TM9SF3Q9HD45 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.28■□□□□ 0.68
TM9SF3Q9HD45 PCDHAC2-203ENST00000615316 3011 ntBASIC19.27■□□□□ 0.68
TM9SF3Q9HD45 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TM9SF3Q9HD45 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TM9SF3Q9HD45 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TM9SF3Q9HD45 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TM9SF3Q9HD45 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TM9SF3Q9HD45 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TM9SF3Q9HD45 AL162377.1-201ENST00000618844 1793 ntBASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms