Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CLK4Q9HAZ1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLK4Q9HAZ1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLK4Q9HAZ1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CLK4Q9HAZ1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.75■□□□□ 0.59
CLK4Q9HAZ1 PHGDH-210ENST00000641115 1638 ntBASIC18.75■□□□□ 0.59
CLK4Q9HAZ1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLK4Q9HAZ1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLK4Q9HAZ1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLK4Q9HAZ1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.75■□□□□ 0.59
CLK4Q9HAZ1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.75■□□□□ 0.59
CLK4Q9HAZ1 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.75■□□□□ 0.59
CLK4Q9HAZ1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.75■□□□□ 0.59
CLK4Q9HAZ1 RN7SL471P-201ENST00000580476 299 ntBASIC18.75■□□□□ 0.59
CLK4Q9HAZ1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.75■□□□□ 0.59
CLK4Q9HAZ1 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.75■□□□□ 0.59
CLK4Q9HAZ1 AC073648.6-201ENST00000641589 218 ntBASIC18.75■□□□□ 0.59
CLK4Q9HAZ1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLK4Q9HAZ1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.75■□□□□ 0.59
CLK4Q9HAZ1 AC120498.9-201ENST00000339021 3867 ntBASIC18.75■□□□□ 0.59
CLK4Q9HAZ1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.75■□□□□ 0.59
CLK4Q9HAZ1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLK4Q9HAZ1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.75■□□□□ 0.59
CLK4Q9HAZ1 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLK4Q9HAZ1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.75■□□□□ 0.59
CLK4Q9HAZ1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.75■□□□□ 0.59
CLK4Q9HAZ1 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLK4Q9HAZ1 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.75■□□□□ 0.59
CLK4Q9HAZ1 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLK4Q9HAZ1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.74■□□□□ 0.59
CLK4Q9HAZ1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLK4Q9HAZ1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLK4Q9HAZ1 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.74■□□□□ 0.59
CLK4Q9HAZ1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLK4Q9HAZ1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLK4Q9HAZ1 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CLK4Q9HAZ1 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.74■□□□□ 0.59
CLK4Q9HAZ1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLK4Q9HAZ1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLK4Q9HAZ1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLK4Q9HAZ1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CLK4Q9HAZ1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLK4Q9HAZ1 AP001271.2-201ENST00000624018 1556 ntBASIC18.74■□□□□ 0.59
CLK4Q9HAZ1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLK4Q9HAZ1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CLK4Q9HAZ1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
CLK4Q9HAZ1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.74■□□□□ 0.59
CLK4Q9HAZ1 MTDHP1-201ENST00000605323 784 ntBASIC18.74■□□□□ 0.59
CLK4Q9HAZ1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLK4Q9HAZ1 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CLK4Q9HAZ1 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLK4Q9HAZ1 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CLK4Q9HAZ1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.74■□□□□ 0.59
CLK4Q9HAZ1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLK4Q9HAZ1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLK4Q9HAZ1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.73■□□□□ 0.59
CLK4Q9HAZ1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.73■□□□□ 0.59
CLK4Q9HAZ1 Z82202.1-201ENST00000623446 1880 ntBASIC18.73■□□□□ 0.59
CLK4Q9HAZ1 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLK4Q9HAZ1 AC007613.1-201ENST00000572811 2597 ntBASIC18.73■□□□□ 0.59
CLK4Q9HAZ1 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.73■□□□□ 0.59
CLK4Q9HAZ1 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLK4Q9HAZ1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.73■□□□□ 0.59
CLK4Q9HAZ1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.73■□□□□ 0.59
CLK4Q9HAZ1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLK4Q9HAZ1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.73■□□□□ 0.59
CLK4Q9HAZ1 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.73■□□□□ 0.59
CLK4Q9HAZ1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.73■□□□□ 0.59
CLK4Q9HAZ1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.73■□□□□ 0.59
CLK4Q9HAZ1 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.73■□□□□ 0.59
CLK4Q9HAZ1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.73■□□□□ 0.59
CLK4Q9HAZ1 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.73■□□□□ 0.59
CLK4Q9HAZ1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.73■□□□□ 0.59
CLK4Q9HAZ1 TMEM191A-211ENST00000637163 1067 ntBASIC18.73■□□□□ 0.59
CLK4Q9HAZ1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLK4Q9HAZ1 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CLK4Q9HAZ1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLK4Q9HAZ1 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CLK4Q9HAZ1 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLK4Q9HAZ1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLK4Q9HAZ1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.73■□□□□ 0.59
CLK4Q9HAZ1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLK4Q9HAZ1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CLK4Q9HAZ1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLK4Q9HAZ1 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLK4Q9HAZ1 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLK4Q9HAZ1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CLK4Q9HAZ1 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLK4Q9HAZ1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLK4Q9HAZ1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLK4Q9HAZ1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLK4Q9HAZ1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
CLK4Q9HAZ1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.72■□□□□ 0.59
CLK4Q9HAZ1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLK4Q9HAZ1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLK4Q9HAZ1 AC133681.1-201ENST00000465482 601 ntBASIC18.72■□□□□ 0.59
CLK4Q9HAZ1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.72■□□□□ 0.59
CLK4Q9HAZ1 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLK4Q9HAZ1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.72■□□□□ 0.59
CLK4Q9HAZ1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms