Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
NXF3Q9H4D5 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NXF3Q9H4D5 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.88■□□□□ 0.93
NXF3Q9H4D5 SDHAP1-207ENST00000440850 2000 ntBASIC20.87■□□□□ 0.93
NXF3Q9H4D5 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NXF3Q9H4D5 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.87■□□□□ 0.93
NXF3Q9H4D5 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.87■□□□□ 0.93
NXF3Q9H4D5 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.87■□□□□ 0.93
NXF3Q9H4D5 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.87■□□□□ 0.93
NXF3Q9H4D5 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NXF3Q9H4D5 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NXF3Q9H4D5 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
NXF3Q9H4D5 CCR12P-201ENST00000446203 998 ntBASIC20.87■□□□□ 0.93
NXF3Q9H4D5 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.87■□□□□ 0.93
NXF3Q9H4D5 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.87■□□□□ 0.93
NXF3Q9H4D5 AL023803.3-201ENST00000615559 522 ntBASIC20.87■□□□□ 0.93
NXF3Q9H4D5 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NXF3Q9H4D5 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NXF3Q9H4D5 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NXF3Q9H4D5 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NXF3Q9H4D5 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.87■□□□□ 0.93
NXF3Q9H4D5 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NXF3Q9H4D5 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.87■□□□□ 0.93
NXF3Q9H4D5 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NXF3Q9H4D5 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.86■□□□□ 0.93
NXF3Q9H4D5 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NXF3Q9H4D5 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.86■□□□□ 0.93
NXF3Q9H4D5 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
NXF3Q9H4D5 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.86■□□□□ 0.93
NXF3Q9H4D5 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NXF3Q9H4D5 AC007663.1-201ENST00000438948 1240 ntBASIC20.86■□□□□ 0.93
NXF3Q9H4D5 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NXF3Q9H4D5 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.86■□□□□ 0.93
NXF3Q9H4D5 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NXF3Q9H4D5 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NXF3Q9H4D5 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.86■□□□□ 0.93
NXF3Q9H4D5 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.86■□□□□ 0.93
NXF3Q9H4D5 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
NXF3Q9H4D5 AC125437.2-201ENST00000625180 2167 ntBASIC20.86■□□□□ 0.93
NXF3Q9H4D5 AC092338.2-201ENST00000568827 1415 ntBASIC20.86■□□□□ 0.93
NXF3Q9H4D5 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NXF3Q9H4D5 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
NXF3Q9H4D5 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.86■□□□□ 0.93
NXF3Q9H4D5 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
NXF3Q9H4D5 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.85■□□□□ 0.93
NXF3Q9H4D5 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
NXF3Q9H4D5 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NXF3Q9H4D5 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.85■□□□□ 0.93
NXF3Q9H4D5 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NXF3Q9H4D5 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NXF3Q9H4D5 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NXF3Q9H4D5 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NXF3Q9H4D5 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NXF3Q9H4D5 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NXF3Q9H4D5 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NXF3Q9H4D5 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.85■□□□□ 0.93
NXF3Q9H4D5 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NXF3Q9H4D5 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.85■□□□□ 0.93
NXF3Q9H4D5 LIN28AP1-201ENST00000429574 405 ntBASIC20.85■□□□□ 0.93
NXF3Q9H4D5 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
NXF3Q9H4D5 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.85■□□□□ 0.93
NXF3Q9H4D5 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.85■□□□□ 0.93
NXF3Q9H4D5 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.85■□□□□ 0.93
NXF3Q9H4D5 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
NXF3Q9H4D5 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NXF3Q9H4D5 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.85■□□□□ 0.93
NXF3Q9H4D5 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.85■□□□□ 0.93
NXF3Q9H4D5 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NXF3Q9H4D5 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.85■□□□□ 0.93
NXF3Q9H4D5 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NXF3Q9H4D5 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NXF3Q9H4D5 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.85■□□□□ 0.93
NXF3Q9H4D5 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.85■□□□□ 0.93
NXF3Q9H4D5 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NXF3Q9H4D5 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NXF3Q9H4D5 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NXF3Q9H4D5 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NXF3Q9H4D5 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NXF3Q9H4D5 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NXF3Q9H4D5 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NXF3Q9H4D5 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
NXF3Q9H4D5 ATP5G1P1-201ENST00000448724 379 ntBASIC20.84■□□□□ 0.93
NXF3Q9H4D5 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NXF3Q9H4D5 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.84■□□□□ 0.93
NXF3Q9H4D5 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
NXF3Q9H4D5 AL049597.2-201ENST00000565575 961 ntBASIC20.84■□□□□ 0.93
NXF3Q9H4D5 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
NXF3Q9H4D5 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NXF3Q9H4D5 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.84■□□□□ 0.93
NXF3Q9H4D5 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
NXF3Q9H4D5 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.84■□□□□ 0.93
NXF3Q9H4D5 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
NXF3Q9H4D5 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.84■□□□□ 0.93
NXF3Q9H4D5 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NXF3Q9H4D5 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NXF3Q9H4D5 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.83■□□□□ 0.93
NXF3Q9H4D5 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NXF3Q9H4D5 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.83■□□□□ 0.93
NXF3Q9H4D5 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NXF3Q9H4D5 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms