Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CHMP4BQ9H444 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
CHMP4BQ9H444 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC24.35■■□□□ 1.49
CHMP4BQ9H444 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CHMP4BQ9H444 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CHMP4BQ9H444 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CHMP4BQ9H444 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CHMP4BQ9H444 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CHMP4BQ9H444 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CHMP4BQ9H444 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC24.34■■□□□ 1.49
CHMP4BQ9H444 KRASP1-201ENST00000407852 552 ntBASIC24.34■■□□□ 1.49
CHMP4BQ9H444 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC24.34■■□□□ 1.49
CHMP4BQ9H444 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
CHMP4BQ9H444 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC24.34■■□□□ 1.49
CHMP4BQ9H444 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC24.34■■□□□ 1.49
CHMP4BQ9H444 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
CHMP4BQ9H444 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
CHMP4BQ9H444 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
CHMP4BQ9H444 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CHMP4BQ9H444 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
CHMP4BQ9H444 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC24.34■■□□□ 1.49
CHMP4BQ9H444 TEX21P-204ENST00000641479 1693 ntBASIC24.34■■□□□ 1.49
CHMP4BQ9H444 SDHAP1-207ENST00000440850 2000 ntBASIC24.34■■□□□ 1.49
CHMP4BQ9H444 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CHMP4BQ9H444 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.49
CHMP4BQ9H444 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CHMP4BQ9H444 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CHMP4BQ9H444 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CHMP4BQ9H444 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CHMP4BQ9H444 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC24.33■■□□□ 1.49
CHMP4BQ9H444 AL160286.2-201ENST00000567150 934 ntBASIC24.33■■□□□ 1.49
CHMP4BQ9H444 AC233263.1-201ENST00000578059 224 ntBASIC24.33■■□□□ 1.49
CHMP4BQ9H444 AC006058.3-201ENST00000606217 1069 ntBASIC24.33■■□□□ 1.49
CHMP4BQ9H444 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CHMP4BQ9H444 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC24.33■■□□□ 1.49
CHMP4BQ9H444 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CHMP4BQ9H444 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC24.33■■□□□ 1.48
CHMP4BQ9H444 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC24.33■■□□□ 1.48
CHMP4BQ9H444 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHMP4BQ9H444 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHMP4BQ9H444 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CHMP4BQ9H444 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHMP4BQ9H444 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHMP4BQ9H444 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC24.32■■□□□ 1.48
CHMP4BQ9H444 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC24.32■■□□□ 1.48
CHMP4BQ9H444 AC124016.1-201ENST00000609552 612 ntBASIC24.32■■□□□ 1.48
CHMP4BQ9H444 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHMP4BQ9H444 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHMP4BQ9H444 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHMP4BQ9H444 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CHMP4BQ9H444 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHMP4BQ9H444 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CHMP4BQ9H444 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
CHMP4BQ9H444 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CHMP4BQ9H444 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC24.31■■□□□ 1.48
CHMP4BQ9H444 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHMP4BQ9H444 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHMP4BQ9H444 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CHMP4BQ9H444 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC24.31■■□□□ 1.48
CHMP4BQ9H444 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
CHMP4BQ9H444 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CHMP4BQ9H444 ISG20-202ENST00000379224 540 ntTSL 3 BASIC24.31■■□□□ 1.48
CHMP4BQ9H444 SERF2-207ENST00000409614 582 ntTSL 2 BASIC24.31■■□□□ 1.48
CHMP4BQ9H444 POU5F1P3-201ENST00000428824 1078 ntBASIC24.31■■□□□ 1.48
CHMP4BQ9H444 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC24.31■■□□□ 1.48
CHMP4BQ9H444 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHMP4BQ9H444 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHMP4BQ9H444 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC24.31■■□□□ 1.48
CHMP4BQ9H444 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC24.31■■□□□ 1.48
CHMP4BQ9H444 AC073648.6-201ENST00000641589 218 ntBASIC24.31■■□□□ 1.48
CHMP4BQ9H444 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHMP4BQ9H444 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC24.31■■□□□ 1.48
CHMP4BQ9H444 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHMP4BQ9H444 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
CHMP4BQ9H444 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC24.31■■□□□ 1.48
CHMP4BQ9H444 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHMP4BQ9H444 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC24.3■■□□□ 1.48
CHMP4BQ9H444 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC24.3■■□□□ 1.48
CHMP4BQ9H444 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHMP4BQ9H444 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
CHMP4BQ9H444 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CHMP4BQ9H444 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC24.3■■□□□ 1.48
CHMP4BQ9H444 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHMP4BQ9H444 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHMP4BQ9H444 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
CHMP4BQ9H444 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHMP4BQ9H444 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHMP4BQ9H444 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHMP4BQ9H444 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC24.3■■□□□ 1.48
CHMP4BQ9H444 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
CHMP4BQ9H444 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CHMP4BQ9H444 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHMP4BQ9H444 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHMP4BQ9H444 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC24.3■■□□□ 1.48
CHMP4BQ9H444 IRX5-204ENST00000560154 879 ntTSL 5 BASIC24.3■■□□□ 1.48
CHMP4BQ9H444 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC24.3■■□□□ 1.48
CHMP4BQ9H444 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
CHMP4BQ9H444 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CHMP4BQ9H444 HLA-A-209ENST00000638375 975 ntBASIC24.3■■□□□ 1.48
CHMP4BQ9H444 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms