Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.37■■□□□ 1.01
CCDC113Q9H0I3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CCDC113Q9H0I3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC113Q9H0I3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CCDC113Q9H0I3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CCDC113Q9H0I3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC113Q9H0I3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC113Q9H0I3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC113Q9H0I3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC113Q9H0I3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC113Q9H0I3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.36■■□□□ 1.01
CCDC113Q9H0I3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC113Q9H0I3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC113Q9H0I3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC113Q9H0I3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CCDC113Q9H0I3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC113Q9H0I3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC113Q9H0I3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
CCDC113Q9H0I3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.36■■□□□ 1.01
CCDC113Q9H0I3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC113Q9H0I3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.36■■□□□ 1.01
CCDC113Q9H0I3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.36■■□□□ 1.01
CCDC113Q9H0I3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.36■■□□□ 1.01
CCDC113Q9H0I3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.36■■□□□ 1.01
CCDC113Q9H0I3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.36■■□□□ 1.01
CCDC113Q9H0I3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.36■■□□□ 1.01
CCDC113Q9H0I3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC113Q9H0I3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.36■■□□□ 1.01
CCDC113Q9H0I3 REXO1L10P-201ENST00000615707 1290 ntBASIC21.36■■□□□ 1.01
CCDC113Q9H0I3 REXO1L12P-201ENST00000622156 912 ntBASIC21.36■■□□□ 1.01
CCDC113Q9H0I3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CCDC113Q9H0I3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.36■■□□□ 1.01
CCDC113Q9H0I3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.36■■□□□ 1.01
CCDC113Q9H0I3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC113Q9H0I3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC113Q9H0I3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.35■■□□□ 1.01
CCDC113Q9H0I3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC113Q9H0I3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC113Q9H0I3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC113Q9H0I3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.35■■□□□ 1.01
CCDC113Q9H0I3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC113Q9H0I3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC113Q9H0I3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CCDC113Q9H0I3 MESTP1-201ENST00000404287 994 ntBASIC21.35■■□□□ 1.01
CCDC113Q9H0I3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC113Q9H0I3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC113Q9H0I3 AL355355.2-201ENST00000442321 338 ntBASIC21.35■■□□□ 1.01
CCDC113Q9H0I3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC113Q9H0I3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
CCDC113Q9H0I3 AC116562.2-201ENST00000507042 360 ntBASIC21.35■■□□□ 1.01
CCDC113Q9H0I3 AC026271.3-201ENST00000571884 352 ntBASIC21.35■■□□□ 1.01
CCDC113Q9H0I3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.35■■□□□ 1.01
CCDC113Q9H0I3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC113Q9H0I3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC113Q9H0I3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC113Q9H0I3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC113Q9H0I3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC113Q9H0I3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.35■■□□□ 1.01
CCDC113Q9H0I3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC113Q9H0I3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.35■■□□□ 1.01
CCDC113Q9H0I3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC113Q9H0I3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC21.35■■□□□ 1.01
CCDC113Q9H0I3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC113Q9H0I3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CCDC113Q9H0I3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.34■■□□□ 1.01
CCDC113Q9H0I3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC113Q9H0I3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CCDC113Q9H0I3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CCDC113Q9H0I3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.34■■□□□ 1.01
CCDC113Q9H0I3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC113Q9H0I3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.34■■□□□ 1.01
CCDC113Q9H0I3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC113Q9H0I3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.34■■□□□ 1.01
CCDC113Q9H0I3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CCDC113Q9H0I3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.34■■□□□ 1.01
CCDC113Q9H0I3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.34■■□□□ 1.01
CCDC113Q9H0I3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC113Q9H0I3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC113Q9H0I3 AFG3L1P-217ENST00000557444 2447 ntBASIC21.34■■□□□ 1.01
CCDC113Q9H0I3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC113Q9H0I3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC113Q9H0I3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC113Q9H0I3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.33■■□□□ 1.01
CCDC113Q9H0I3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.33■■□□□ 1.01
CCDC113Q9H0I3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC113Q9H0I3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC113Q9H0I3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC113Q9H0I3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
CCDC113Q9H0I3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC113Q9H0I3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CCDC113Q9H0I3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC113Q9H0I3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.33■■□□□ 1.01
CCDC113Q9H0I3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
CCDC113Q9H0I3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.33■■□□□ 1.01
CCDC113Q9H0I3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.33■■□□□ 1.01
CCDC113Q9H0I3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC113Q9H0I3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.33■■□□□ 1.01
CCDC113Q9H0I3 AL031985.4-201ENST00000642138 673 ntBASIC21.33■■□□□ 1.01
CCDC113Q9H0I3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.33■■□□□ 1.01
CCDC113Q9H0I3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.33■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms