Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM55Q9BYV6 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM55Q9BYV6 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM55Q9BYV6 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM55Q9BYV6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM55Q9BYV6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
TRIM55Q9BYV6 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM55Q9BYV6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM55Q9BYV6 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.45■□□□□ 0.7
TRIM55Q9BYV6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM55Q9BYV6 GCSHP5-201ENST00000443090 522 ntBASIC19.45■□□□□ 0.7
TRIM55Q9BYV6 AC006058.3-201ENST00000606217 1069 ntBASIC19.45■□□□□ 0.7
TRIM55Q9BYV6 AC243732.1-201ENST00000612648 864 ntBASIC19.45■□□□□ 0.7
TRIM55Q9BYV6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM55Q9BYV6 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TRIM55Q9BYV6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM55Q9BYV6 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM55Q9BYV6 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.45■□□□□ 0.7
TRIM55Q9BYV6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM55Q9BYV6 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM55Q9BYV6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM55Q9BYV6 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM55Q9BYV6 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TRIM55Q9BYV6 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
TRIM55Q9BYV6 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
TRIM55Q9BYV6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TRIM55Q9BYV6 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM55Q9BYV6 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM55Q9BYV6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM55Q9BYV6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM55Q9BYV6 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM55Q9BYV6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM55Q9BYV6 PGM5P4-201ENST00000421970 445 ntBASIC19.44■□□□□ 0.7
TRIM55Q9BYV6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TRIM55Q9BYV6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM55Q9BYV6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.44■□□□□ 0.7
TRIM55Q9BYV6 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM55Q9BYV6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.44■□□□□ 0.7
TRIM55Q9BYV6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM55Q9BYV6 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.44■□□□□ 0.7
TRIM55Q9BYV6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM55Q9BYV6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM55Q9BYV6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM55Q9BYV6 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TRIM55Q9BYV6 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM55Q9BYV6 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
TRIM55Q9BYV6 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TRIM55Q9BYV6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM55Q9BYV6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM55Q9BYV6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TRIM55Q9BYV6 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM55Q9BYV6 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM55Q9BYV6 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM55Q9BYV6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM55Q9BYV6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM55Q9BYV6 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM55Q9BYV6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM55Q9BYV6 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM55Q9BYV6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.43■□□□□ 0.7
TRIM55Q9BYV6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM55Q9BYV6 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM55Q9BYV6 AC079598.2-202ENST00000546624 1451 ntBASIC19.43■□□□□ 0.7
TRIM55Q9BYV6 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
TRIM55Q9BYV6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM55Q9BYV6 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM55Q9BYV6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TRIM55Q9BYV6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.43■□□□□ 0.7
TRIM55Q9BYV6 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TRIM55Q9BYV6 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM55Q9BYV6 AP001271.2-201ENST00000624018 1556 ntBASIC19.43■□□□□ 0.7
TRIM55Q9BYV6 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM55Q9BYV6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM55Q9BYV6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM55Q9BYV6 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM55Q9BYV6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TRIM55Q9BYV6 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM55Q9BYV6 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM55Q9BYV6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM55Q9BYV6 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TRIM55Q9BYV6 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM55Q9BYV6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM55Q9BYV6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM55Q9BYV6 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM55Q9BYV6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TRIM55Q9BYV6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM55Q9BYV6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM55Q9BYV6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM55Q9BYV6 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM55Q9BYV6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM55Q9BYV6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.42■□□□□ 0.7
TRIM55Q9BYV6 AL158047.1-201ENST00000445918 881 ntBASIC19.42■□□□□ 0.7
TRIM55Q9BYV6 AC128676.1-201ENST00000454392 318 ntBASIC19.42■□□□□ 0.7
TRIM55Q9BYV6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM55Q9BYV6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM55Q9BYV6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM55Q9BYV6 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TRIM55Q9BYV6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM55Q9BYV6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.42■□□□□ 0.7
TRIM55Q9BYV6 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM55Q9BYV6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms