Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.16■□□□□ 0.82
LRRC3Q9BY71 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LRRC3Q9BY71 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRRC3Q9BY71 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRRC3Q9BY71 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
LRRC3Q9BY71 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRRC3Q9BY71 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
LRRC3Q9BY71 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.15■□□□□ 0.82
LRRC3Q9BY71 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRRC3Q9BY71 FAM8A6P-201ENST00000407496 1135 ntBASIC20.15■□□□□ 0.82
LRRC3Q9BY71 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.15■□□□□ 0.82
LRRC3Q9BY71 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.15■□□□□ 0.82
LRRC3Q9BY71 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
LRRC3Q9BY71 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.15■□□□□ 0.82
LRRC3Q9BY71 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.15■□□□□ 0.82
LRRC3Q9BY71 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.15■□□□□ 0.82
LRRC3Q9BY71 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.15■□□□□ 0.82
LRRC3Q9BY71 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.15■□□□□ 0.82
LRRC3Q9BY71 MYC-208ENST00000641036 567 ntBASIC20.15■□□□□ 0.82
LRRC3Q9BY71 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRRC3Q9BY71 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LRRC3Q9BY71 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
LRRC3Q9BY71 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
LRRC3Q9BY71 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LRRC3Q9BY71 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LRRC3Q9BY71 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.15■□□□□ 0.82
LRRC3Q9BY71 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.15■□□□□ 0.82
LRRC3Q9BY71 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
LRRC3Q9BY71 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
LRRC3Q9BY71 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.14■□□□□ 0.82
LRRC3Q9BY71 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.14■□□□□ 0.82
LRRC3Q9BY71 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.14■□□□□ 0.82
LRRC3Q9BY71 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LRRC3Q9BY71 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.14■□□□□ 0.82
LRRC3Q9BY71 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC3Q9BY71 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.14■□□□□ 0.81
LRRC3Q9BY71 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC3Q9BY71 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.14■□□□□ 0.81
LRRC3Q9BY71 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.14■□□□□ 0.81
LRRC3Q9BY71 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.14■□□□□ 0.81
LRRC3Q9BY71 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
LRRC3Q9BY71 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC3Q9BY71 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC3Q9BY71 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC3Q9BY71 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.14■□□□□ 0.81
LRRC3Q9BY71 YBX1P2-201ENST00000489612 999 ntBASIC20.14■□□□□ 0.81
LRRC3Q9BY71 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
LRRC3Q9BY71 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
LRRC3Q9BY71 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.14■□□□□ 0.81
LRRC3Q9BY71 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
LRRC3Q9BY71 AC141257.4-201ENST00000634557 245 ntBASIC20.14■□□□□ 0.81
LRRC3Q9BY71 AC136944.6-201ENST00000634818 245 ntBASIC20.14■□□□□ 0.81
LRRC3Q9BY71 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC3Q9BY71 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.14■□□□□ 0.81
LRRC3Q9BY71 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC3Q9BY71 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC3Q9BY71 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC3Q9BY71 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
LRRC3Q9BY71 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRRC3Q9BY71 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.14■□□□□ 0.81
LRRC3Q9BY71 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
LRRC3Q9BY71 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
LRRC3Q9BY71 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC3Q9BY71 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC3Q9BY71 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC3Q9BY71 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.13■□□□□ 0.81
LRRC3Q9BY71 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.13■□□□□ 0.81
LRRC3Q9BY71 KRT8P11-201ENST00000409686 1436 ntBASIC20.13■□□□□ 0.81
LRRC3Q9BY71 LINC01006-201ENST00000333319 2292 ntBASIC20.13■□□□□ 0.81
LRRC3Q9BY71 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC3Q9BY71 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC3Q9BY71 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.13■□□□□ 0.81
LRRC3Q9BY71 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
LRRC3Q9BY71 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.13■□□□□ 0.81
LRRC3Q9BY71 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.13■□□□□ 0.81
LRRC3Q9BY71 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC3Q9BY71 AC087388.1-201ENST00000571370 1112 ntBASIC20.13■□□□□ 0.81
LRRC3Q9BY71 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.13■□□□□ 0.81
LRRC3Q9BY71 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
LRRC3Q9BY71 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRRC3Q9BY71 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.13■□□□□ 0.81
LRRC3Q9BY71 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.12■□□□□ 0.81
LRRC3Q9BY71 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.12■□□□□ 0.81
LRRC3Q9BY71 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.12■□□□□ 0.81
LRRC3Q9BY71 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC3Q9BY71 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC3Q9BY71 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC3Q9BY71 RNF152P1-201ENST00000397754 604 ntBASIC20.12■□□□□ 0.81
LRRC3Q9BY71 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC3Q9BY71 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.12■□□□□ 0.81
LRRC3Q9BY71 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC3Q9BY71 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC3Q9BY71 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.12■□□□□ 0.81
LRRC3Q9BY71 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC3Q9BY71 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC3Q9BY71 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.12■□□□□ 0.81
LRRC3Q9BY71 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
LRRC3Q9BY71 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRRC3Q9BY71 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRRC3Q9BY71 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms