Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COPS4Q9BT78 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COPS4Q9BT78 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COPS4Q9BT78 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COPS4Q9BT78 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.69■□□□□ 0.42
COPS4Q9BT78 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
COPS4Q9BT78 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.69■□□□□ 0.42
COPS4Q9BT78 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COPS4Q9BT78 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.69■□□□□ 0.42
COPS4Q9BT78 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.69■□□□□ 0.42
COPS4Q9BT78 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.69■□□□□ 0.42
COPS4Q9BT78 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.69■□□□□ 0.42
COPS4Q9BT78 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COPS4Q9BT78 MIR5787-201ENST00000611784 55 ntBASIC17.69■□□□□ 0.42
COPS4Q9BT78 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.69■□□□□ 0.42
COPS4Q9BT78 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COPS4Q9BT78 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
COPS4Q9BT78 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
COPS4Q9BT78 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COPS4Q9BT78 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
COPS4Q9BT78 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.69■□□□□ 0.42
COPS4Q9BT78 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.69■□□□□ 0.42
COPS4Q9BT78 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.69■□□□□ 0.42
COPS4Q9BT78 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.68■□□□□ 0.42
COPS4Q9BT78 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.68■□□□□ 0.42
COPS4Q9BT78 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPS4Q9BT78 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPS4Q9BT78 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COPS4Q9BT78 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.68■□□□□ 0.42
COPS4Q9BT78 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.68■□□□□ 0.42
COPS4Q9BT78 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.68■□□□□ 0.42
COPS4Q9BT78 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.68■□□□□ 0.42
COPS4Q9BT78 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
COPS4Q9BT78 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPS4Q9BT78 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPS4Q9BT78 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPS4Q9BT78 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPS4Q9BT78 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.68■□□□□ 0.42
COPS4Q9BT78 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.68■□□□□ 0.42
COPS4Q9BT78 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COPS4Q9BT78 AC011767.1-201ENST00000617410 1153 ntBASIC17.68■□□□□ 0.42
COPS4Q9BT78 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPS4Q9BT78 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPS4Q9BT78 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
COPS4Q9BT78 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.68■□□□□ 0.42
COPS4Q9BT78 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPS4Q9BT78 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPS4Q9BT78 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
COPS4Q9BT78 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.68■□□□□ 0.42
COPS4Q9BT78 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COPS4Q9BT78 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
COPS4Q9BT78 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.68■□□□□ 0.42
COPS4Q9BT78 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COPS4Q9BT78 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPS4Q9BT78 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COPS4Q9BT78 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
COPS4Q9BT78 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPS4Q9BT78 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPS4Q9BT78 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
COPS4Q9BT78 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COPS4Q9BT78 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPS4Q9BT78 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.67■□□□□ 0.42
COPS4Q9BT78 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPS4Q9BT78 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COPS4Q9BT78 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COPS4Q9BT78 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPS4Q9BT78 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPS4Q9BT78 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COPS4Q9BT78 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPS4Q9BT78 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.67■□□□□ 0.42
COPS4Q9BT78 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.67■□□□□ 0.42
COPS4Q9BT78 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.67■□□□□ 0.42
COPS4Q9BT78 AL031963.3-201ENST00000606441 850 ntBASIC17.67■□□□□ 0.42
COPS4Q9BT78 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.67■□□□□ 0.42
COPS4Q9BT78 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COPS4Q9BT78 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COPS4Q9BT78 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPS4Q9BT78 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPS4Q9BT78 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPS4Q9BT78 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPS4Q9BT78 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COPS4Q9BT78 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPS4Q9BT78 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPS4Q9BT78 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
COPS4Q9BT78 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COPS4Q9BT78 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.66■□□□□ 0.42
COPS4Q9BT78 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.66■□□□□ 0.42
COPS4Q9BT78 AC141586.3-201ENST00000562166 1838 ntBASIC17.66■□□□□ 0.42
COPS4Q9BT78 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COPS4Q9BT78 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
COPS4Q9BT78 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.66■□□□□ 0.42
COPS4Q9BT78 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.66■□□□□ 0.42
COPS4Q9BT78 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.66■□□□□ 0.42
COPS4Q9BT78 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.66■□□□□ 0.42
COPS4Q9BT78 AL162430.1-201ENST00000480705 870 ntBASIC17.66■□□□□ 0.42
COPS4Q9BT78 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
COPS4Q9BT78 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.66■□□□□ 0.42
COPS4Q9BT78 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.66■□□□□ 0.42
COPS4Q9BT78 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.66■□□□□ 0.42
COPS4Q9BT78 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms