Protein–RNA interactions for Protein: Q96RS6

NUDCD1, NudC domain-containing protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1Q96RS6 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUDCD1Q96RS6 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
NUDCD1Q96RS6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
NUDCD1Q96RS6 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
NUDCD1Q96RS6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUDCD1Q96RS6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUDCD1Q96RS6 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUDCD1Q96RS6 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUDCD1Q96RS6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
NUDCD1Q96RS6 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
NUDCD1Q96RS6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
NUDCD1Q96RS6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.93■□□□□ 0.78
NUDCD1Q96RS6 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUDCD1Q96RS6 AC239809.2-201ENST00000415381 517 ntBASIC19.93■□□□□ 0.78
NUDCD1Q96RS6 AC133681.1-201ENST00000465482 601 ntBASIC19.93■□□□□ 0.78
NUDCD1Q96RS6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
NUDCD1Q96RS6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.93■□□□□ 0.78
NUDCD1Q96RS6 C1QBPP2-201ENST00000528754 825 ntBASIC19.93■□□□□ 0.78
NUDCD1Q96RS6 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.93■□□□□ 0.78
NUDCD1Q96RS6 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.93■□□□□ 0.78
NUDCD1Q96RS6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.93■□□□□ 0.78
NUDCD1Q96RS6 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUDCD1Q96RS6 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.93■□□□□ 0.78
NUDCD1Q96RS6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
NUDCD1Q96RS6 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NUDCD1Q96RS6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
NUDCD1Q96RS6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NUDCD1Q96RS6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 KRASP1-201ENST00000407852 552 ntBASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 AC124016.1-201ENST00000609552 612 ntBASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 NEFHP1-201ENST00000412845 2629 ntBASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 NBPF21P-201ENST00000425093 1451 ntBASIC19.92■□□□□ 0.78
NUDCD1Q96RS6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NUDCD1Q96RS6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
NUDCD1Q96RS6 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUDCD1Q96RS6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUDCD1Q96RS6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NUDCD1Q96RS6 YBX1P10-201ENST00000444752 975 ntBASIC19.91■□□□□ 0.78
NUDCD1Q96RS6 AC098590.1-201ENST00000468126 897 ntBASIC19.91■□□□□ 0.78
NUDCD1Q96RS6 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
NUDCD1Q96RS6 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.91■□□□□ 0.78
NUDCD1Q96RS6 RPPH1-201ENST00000516869 333 ntBASIC19.91■□□□□ 0.78
NUDCD1Q96RS6 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
NUDCD1Q96RS6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NUDCD1Q96RS6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.91■□□□□ 0.78
NUDCD1Q96RS6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.91■□□□□ 0.78
NUDCD1Q96RS6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NUDCD1Q96RS6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.91■□□□□ 0.78
NUDCD1Q96RS6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.91■□□□□ 0.78
NUDCD1Q96RS6 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
NUDCD1Q96RS6 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NUDCD1Q96RS6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUDCD1Q96RS6 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUDCD1Q96RS6 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUDCD1Q96RS6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
NUDCD1Q96RS6 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
NUDCD1Q96RS6 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NUDCD1Q96RS6 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.91■□□□□ 0.78
NUDCD1Q96RS6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.91■□□□□ 0.78
NUDCD1Q96RS6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUDCD1Q96RS6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.9■□□□□ 0.78
NUDCD1Q96RS6 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.9■□□□□ 0.78
NUDCD1Q96RS6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUDCD1Q96RS6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NUDCD1Q96RS6 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms