Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
BBS4Q96RK4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
BBS4Q96RK4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BBS4Q96RK4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
BBS4Q96RK4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
BBS4Q96RK4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.29■□□□□ 0.52
BBS4Q96RK4 ESRRAP1-201ENST00000400596 1257 ntBASIC18.29■□□□□ 0.52
BBS4Q96RK4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BBS4Q96RK4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.29■□□□□ 0.52
BBS4Q96RK4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BBS4Q96RK4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.29■□□□□ 0.52
BBS4Q96RK4 AC069544.1-201ENST00000609399 999 ntBASIC18.29■□□□□ 0.52
BBS4Q96RK4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.29■□□□□ 0.52
BBS4Q96RK4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BBS4Q96RK4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.29■□□□□ 0.52
BBS4Q96RK4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BBS4Q96RK4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
BBS4Q96RK4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.29■□□□□ 0.52
BBS4Q96RK4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
BBS4Q96RK4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BBS4Q96RK4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BBS4Q96RK4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BBS4Q96RK4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
BBS4Q96RK4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BBS4Q96RK4 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.28■□□□□ 0.52
BBS4Q96RK4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
BBS4Q96RK4 NBPF21P-201ENST00000425093 1451 ntBASIC18.28■□□□□ 0.52
BBS4Q96RK4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BBS4Q96RK4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
BBS4Q96RK4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
BBS4Q96RK4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BBS4Q96RK4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
BBS4Q96RK4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.28■□□□□ 0.52
BBS4Q96RK4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.28■□□□□ 0.52
BBS4Q96RK4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
BBS4Q96RK4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.28■□□□□ 0.52
BBS4Q96RK4 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.28■□□□□ 0.52
BBS4Q96RK4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BBS4Q96RK4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BBS4Q96RK4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BBS4Q96RK4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
BBS4Q96RK4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BBS4Q96RK4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BBS4Q96RK4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BBS4Q96RK4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BBS4Q96RK4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BBS4Q96RK4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.28■□□□□ 0.52
BBS4Q96RK4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.28■□□□□ 0.52
BBS4Q96RK4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BBS4Q96RK4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
BBS4Q96RK4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
BBS4Q96RK4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BBS4Q96RK4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
BBS4Q96RK4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
BBS4Q96RK4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BBS4Q96RK4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
BBS4Q96RK4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BBS4Q96RK4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
BBS4Q96RK4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.27■□□□□ 0.52
BBS4Q96RK4 AC004264.1-201ENST00000608354 794 ntBASIC18.27■□□□□ 0.52
BBS4Q96RK4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.52
BBS4Q96RK4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
BBS4Q96RK4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BBS4Q96RK4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
BBS4Q96RK4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
BBS4Q96RK4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
BBS4Q96RK4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.27■□□□□ 0.51
BBS4Q96RK4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
BBS4Q96RK4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
BBS4Q96RK4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
BBS4Q96RK4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
BBS4Q96RK4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
BBS4Q96RK4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BBS4Q96RK4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BBS4Q96RK4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
BBS4Q96RK4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
BBS4Q96RK4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
BBS4Q96RK4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BBS4Q96RK4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BBS4Q96RK4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BBS4Q96RK4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.26■□□□□ 0.51
BBS4Q96RK4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BBS4Q96RK4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
BBS4Q96RK4 AC090340.1-201ENST00000620778 4980 ntBASIC18.26■□□□□ 0.51
BBS4Q96RK4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BBS4Q96RK4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.26■□□□□ 0.51
BBS4Q96RK4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.26■□□□□ 0.51
BBS4Q96RK4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.26■□□□□ 0.51
BBS4Q96RK4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.26■□□□□ 0.51
BBS4Q96RK4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BBS4Q96RK4 MTDHP1-201ENST00000605323 784 ntBASIC18.26■□□□□ 0.51
BBS4Q96RK4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
BBS4Q96RK4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BBS4Q96RK4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BBS4Q96RK4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.26■□□□□ 0.51
BBS4Q96RK4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.26■□□□□ 0.51
BBS4Q96RK4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
BBS4Q96RK4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
BBS4Q96RK4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
BBS4Q96RK4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms