Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTCHD1Q96NR3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTCHD1Q96NR3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTCHD1Q96NR3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTCHD1Q96NR3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.22■□□□□ 0.51
PTCHD1Q96NR3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTCHD1Q96NR3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTCHD1Q96NR3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTCHD1Q96NR3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PTCHD1Q96NR3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTCHD1Q96NR3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.21■□□□□ 0.51
PTCHD1Q96NR3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.21■□□□□ 0.51
PTCHD1Q96NR3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.21■□□□□ 0.51
PTCHD1Q96NR3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
PTCHD1Q96NR3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTCHD1Q96NR3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTCHD1Q96NR3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTCHD1Q96NR3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTCHD1Q96NR3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.21■□□□□ 0.51
PTCHD1Q96NR3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCHD1Q96NR3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PTCHD1Q96NR3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTCHD1Q96NR3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCHD1Q96NR3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCHD1Q96NR3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PTCHD1Q96NR3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.2■□□□□ 0.5
PTCHD1Q96NR3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PTCHD1Q96NR3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTCHD1Q96NR3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.2■□□□□ 0.5
PTCHD1Q96NR3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCHD1Q96NR3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.2■□□□□ 0.5
PTCHD1Q96NR3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.2■□□□□ 0.5
PTCHD1Q96NR3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
PTCHD1Q96NR3 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.2■□□□□ 0.5
PTCHD1Q96NR3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.2■□□□□ 0.5
PTCHD1Q96NR3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PTCHD1Q96NR3 AP003071.4-201ENST00000562276 1284 ntBASIC18.2■□□□□ 0.5
PTCHD1Q96NR3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.2■□□□□ 0.5
PTCHD1Q96NR3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTCHD1Q96NR3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTCHD1Q96NR3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.2■□□□□ 0.5
PTCHD1Q96NR3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCHD1Q96NR3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCHD1Q96NR3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCHD1Q96NR3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTCHD1Q96NR3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCHD1Q96NR3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTCHD1Q96NR3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.2■□□□□ 0.5
PTCHD1Q96NR3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCHD1Q96NR3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PTCHD1Q96NR3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.19■□□□□ 0.5
PTCHD1Q96NR3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTCHD1Q96NR3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTCHD1Q96NR3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.19■□□□□ 0.5
PTCHD1Q96NR3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCHD1Q96NR3 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.19■□□□□ 0.5
PTCHD1Q96NR3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
PTCHD1Q96NR3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PTCHD1Q96NR3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCHD1Q96NR3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCHD1Q96NR3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCHD1Q96NR3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.19■□□□□ 0.5
PTCHD1Q96NR3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCHD1Q96NR3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PTCHD1Q96NR3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCHD1Q96NR3 NUDT16P1-203ENST00000513809 620 ntBASIC18.19■□□□□ 0.5
PTCHD1Q96NR3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTCHD1Q96NR3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.19■□□□□ 0.5
PTCHD1Q96NR3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.19■□□□□ 0.5
PTCHD1Q96NR3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.19■□□□□ 0.5
PTCHD1Q96NR3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCHD1Q96NR3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTCHD1Q96NR3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PTCHD1Q96NR3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.19■□□□□ 0.5
PTCHD1Q96NR3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.19■□□□□ 0.5
PTCHD1Q96NR3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCHD1Q96NR3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.18■□□□□ 0.5
PTCHD1Q96NR3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.18■□□□□ 0.5
PTCHD1Q96NR3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCHD1Q96NR3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCHD1Q96NR3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTCHD1Q96NR3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.18■□□□□ 0.5
PTCHD1Q96NR3 LINC01465-201ENST00000408887 1940 ntBASIC18.18■□□□□ 0.5
PTCHD1Q96NR3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PTCHD1Q96NR3 AC004980.1-204ENST00000429707 299 ntBASIC18.18■□□□□ 0.5
PTCHD1Q96NR3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.18■□□□□ 0.5
PTCHD1Q96NR3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTCHD1Q96NR3 AL160286.2-201ENST00000567150 934 ntBASIC18.18■□□□□ 0.5
PTCHD1Q96NR3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.18■□□□□ 0.5
PTCHD1Q96NR3 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.18■□□□□ 0.5
PTCHD1Q96NR3 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.18■□□□□ 0.5
PTCHD1Q96NR3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCHD1Q96NR3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.18■□□□□ 0.5
PTCHD1Q96NR3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.18■□□□□ 0.5
PTCHD1Q96NR3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
PTCHD1Q96NR3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PTCHD1Q96NR3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PTCHD1Q96NR3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.18■□□□□ 0.5
PTCHD1Q96NR3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.17■□□□□ 0.5
PTCHD1Q96NR3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms